Protein

View in Explore
Genbank accession
XPK41294.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,56
Protein sequence
MGEYDRFSLAGGLDSSTPYIARTPGTLLQSRNFSPDTDGGYRLRGGFERYDGRLSPSSVSITNLHMTDVVTGILCGDTVTGATSGAIGVVGKVANREIWVDVQSGEFQSGELVAGFTLDFITFEPVATSSYVPNTVDEPSIIIVTPQPGFNPVVGGKIRGDLTGATASVTAVLVSATNMWIYVMPLEGTISADEPVRDQAGGYADTSYSQSVENMIANPDTPAGVWFYLSELRRAKIQPVPGDGNVMGVWELADSVYAFRDQKMFKSTANGWSEVDLGFLMTWTDRAATVVDNDLGTGDVLRGATSGATGKVGFVGYSTQNHSDGYFSVTDITGTFVLGEDLVNTSAGDEVVGKVGQLPVANELPDLSLGMRFVNHNFFATVDTMAMYATTGTGPAFAYNPNIGFCPILTGRDAEDPYDVIVHKDHLFLAYPKASLQHSVVGNPFDWSGSIGALEVGVGSDVTSLVSSPKSLIICTEKDVQSLSGEGIDSWVKDIVTSHNGIARYSGQYQSQTFVLSRNGIVAIDRTDQFGNFSDSATSDRIRNLLRPRYDKCVCAVARKDKGVYAVYYNDGTCIGMATYQGQLIGFYTFDHGGQIVRNAVAPYSRVWFYTDSGFIYQDDVGFSCDGAPKVASFRTSYANQGDPDTRKRFRRCDITFNAESYVNVFVNFSFDKGNGDAQSTIDYGLISSNGGRWDSSNWNQVFWDASEFPTIATDISGVGFDISTMVYISSRIHPEFVVEDISFEWSARRKVR
Physico‐chemical
properties
protein length:753 AA
molecular weight: 81631,81140 Da
isoelectric point:4,66582
aromaticity:0,11288
hydropathy:-0,14183

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XPK41294.1
1 753
Domain Start End Length (AA) Confidence
N-terminal 1 309 309 0,8753
Central domain 310 508 200 0,0911
C-terminal 509 753 244 0,4823
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-309
Central
310-508
C-terminal
509-753

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage HelliStehle_Bas95
[NCBI] 		3398416 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK41294.1 [NCBI]
Genbank nucleotide accession
PQ850607 [NCBI]
CDS location
range 14067 -> 16328
strand +
CDS
ATGGGTGAATATGATCGCTTCTCGCTGGCGGGCGGCCTGGATTCGTCCACGCCATACATCGCCCGTACACCGGGAACGCTATTACAAAGCCGTAACTTTTCACCGGACACTGACGGCGGCTACCGCCTGCGTGGCGGCTTTGAGCGGTACGATGGCCGCCTGTCTCCGTCTTCAGTATCCATCACTAACCTTCATATGACCGACGTTGTGACGGGCATTCTGTGCGGCGATACGGTGACTGGCGCTACGTCCGGTGCAATCGGCGTCGTCGGTAAAGTGGCGAACCGTGAGATTTGGGTGGACGTACAGTCCGGTGAGTTCCAGTCAGGCGAACTGGTGGCAGGTTTCACGCTGGACTTCATCACATTCGAACCGGTGGCAACCAGCAGCTATGTCCCCAACACCGTGGACGAACCGAGCATTATCATCGTCACACCTCAGCCTGGATTTAATCCTGTCGTCGGCGGGAAGATTCGCGGCGACCTGACGGGGGCCACGGCTTCGGTTACCGCAGTGCTGGTATCGGCTACCAATATGTGGATTTATGTAATGCCGCTGGAAGGCACCATCTCCGCTGACGAACCTGTACGCGACCAGGCTGGCGGTTACGCTGATACGTCATACTCCCAAAGCGTCGAGAACATGATTGCTAACCCCGATACTCCAGCGGGTGTATGGTTTTATCTGTCCGAATTACGCCGTGCAAAAATCCAGCCTGTACCTGGCGACGGTAACGTGATGGGCGTGTGGGAACTGGCCGATTCAGTGTACGCCTTCCGTGACCAGAAAATGTTTAAGTCCACAGCTAACGGCTGGTCTGAAGTTGACCTGGGCTTCCTCATGACCTGGACAGACCGAGCAGCAACCGTGGTGGACAACGACCTGGGAACAGGAGACGTTCTTCGCGGCGCTACATCCGGCGCTACGGGGAAAGTAGGCTTTGTGGGCTACAGCACGCAGAATCATTCTGACGGTTACTTCTCCGTGACCGATATTACCGGTACTTTCGTGCTGGGTGAAGACCTGGTGAACACGTCCGCTGGCGACGAGGTTGTCGGCAAAGTGGGACAACTCCCTGTTGCCAATGAACTCCCAGATTTGTCGCTGGGTATGCGCTTTGTCAACCACAACTTCTTCGCTACCGTCGACACTATGGCGATGTACGCAACCACAGGTACTGGCCCGGCGTTTGCCTACAACCCTAACATCGGCTTCTGTCCAATCCTGACCGGGCGCGACGCGGAAGATCCGTACGACGTAATCGTGCACAAGGATCATTTATTCCTGGCCTATCCGAAAGCCAGCTTGCAACATAGCGTCGTCGGCAATCCTTTCGACTGGTCCGGCAGTATCGGTGCGCTGGAAGTCGGCGTGGGTAGTGACGTGACCAGTCTGGTATCATCCCCTAAATCACTCATCATCTGTACCGAGAAAGACGTGCAGTCACTGAGCGGTGAAGGTATCGATAGCTGGGTTAAAGACATCGTGACGTCACACAACGGCATTGCCCGGTACTCCGGTCAGTACCAGTCACAGACGTTCGTGCTGTCGCGTAACGGCATTGTCGCAATCGACCGTACGGATCAGTTCGGTAACTTTAGCGATAGCGCAACAAGCGACCGTATCCGTAACCTGCTCCGTCCACGCTATGACAAGTGCGTGTGCGCGGTGGCACGTAAAGACAAAGGTGTGTACGCCGTGTATTATAACGACGGTACGTGCATCGGTATGGCGACGTATCAGGGACAACTGATCGGCTTCTACACGTTCGACCACGGCGGCCAGATTGTACGCAATGCGGTGGCCCCCTACAGTCGTGTGTGGTTTTACACTGACTCAGGTTTCATCTATCAGGACGACGTTGGCTTCAGTTGTGACGGCGCGCCGAAGGTGGCATCTTTCCGTACATCCTACGCAAACCAGGGTGACCCGGACACACGCAAGCGCTTCCGTCGCTGCGACATTACCTTTAATGCTGAATCGTATGTTAACGTGTTCGTCAACTTCAGTTTCGATAAGGGTAACGGTGACGCACAGTCGACAATCGACTACGGTCTGATCTCGTCGAACGGCGGTCGCTGGGATTCATCAAACTGGAACCAGGTGTTTTGGGATGCGTCAGAGTTCCCGACTATCGCCACGGATATTTCTGGTGTAGGTTTTGACATCAGCACTATGGTTTACATTTCCTCCCGCATTCATCCTGAGTTTGTGGTCGAGGATATTTCCTTCGAATGGTCAGCACGCAGGAAGGTACGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9c5695e2e4fc424af03e6c47c22648de54045ce5d9f9c4df61c1a9a34c048b13
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8107
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank