Protein

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Genbank accession
AXH70883.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MGPNQSQIRDLLKADVAAANAATAQGKVCYIVSLKGWFVGTAGSKSANNIDVVDSADDGFYWASTGGSGLLKGQWNQSGVYRDNVYVTHRNILWRSTKDLTGANTEPSFTNDDWAAEATDDNIYSYDKTETYIAGTTFRIEDRLYRLTTDYDGTEIGDQKEHAEQVTSGVLAKLGSAVPILSDFNPAYTYFKDEFVFYNRSLYRCKKSSTKAAFSTENWELLWDPQVAHLSWDHVPITEGELRIFGNAILKAKLSKTDEYEGSVTKPPLSDYEFYDQLKIESWSSGSKDLITGMVYTDGIGSTWRGNVDGSELVETVAYADRADKSILMSVGCEITDWSPSTKKSVAKGQKFKYNNAIMRSTTTHLEADTVSKPSEQGAGVYVFESHHPEVSLNKLIKASDLSVSNAVASTVYLSPDQHGNIYGTVYRVYFGQLTDDLTEIVTGMGTVKLINSSFETSVWVSEDRGSTTANYREVHSGVNWPSDPVFRVRAIVDLTSGETAKIKVQQGKSVRVESGWIDFTSTNSALKDTGDIIN
Physico‐chemical
properties
protein length:535 AA
molecular weight: 59017,64310 Da
isoelectric point:5,03181
aromaticity:0,10467
hydropathy:-0,41626

Domains

Domains [InterPro]
DC_1986
ATT
8–173
DC_1986
G3DSA:2.10.10.90
STR
125–225
G3DSA:2.10.10.90
DC_1060
STR
127–534
DC_1060
AXH70883.1
1 535
Architecture
ATT
STR
ATT 8-173 | STR 174-534 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage BONAISHI
[NCBI] 		2283011 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio coralliilyticus
[NCBI] 		190893 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AXH70883.1 [NCBI]
Genbank nucleotide accession
MH595538.1 [NCBI]
CDS location
range 148258 -> 149865
strand +
CDS
ATGGGACCAAATCAAAGTCAAATCCGTGACTTACTTAAGGCTGATGTCGCAGCTGCTAATGCCGCTACTGCCCAAGGAAAAGTATGTTACATTGTCTCACTAAAGGGATGGTTCGTTGGTACAGCTGGCAGTAAGTCCGCTAATAACATCGATGTCGTCGATTCAGCAGATGATGGCTTTTACTGGGCTTCTACAGGAGGCAGTGGCCTACTGAAAGGACAGTGGAATCAGTCTGGCGTATATCGCGACAATGTCTATGTCACGCATAGAAACATTCTATGGCGGTCTACTAAAGATCTAACTGGTGCAAATACAGAGCCTTCGTTTACTAATGACGATTGGGCAGCAGAAGCTACTGATGATAATATCTATAGTTATGATAAGACTGAGACTTATATTGCCGGAACCACGTTCCGCATCGAAGATCGTCTATATCGTTTAACGACAGATTATGACGGAACAGAAATAGGCGATCAGAAAGAACATGCTGAACAGGTTACATCTGGCGTACTTGCTAAACTGGGCAGTGCTGTTCCTATTCTTTCTGATTTCAATCCGGCATACACTTACTTCAAGGACGAGTTTGTTTTCTATAATCGCTCCCTATATCGCTGTAAGAAATCATCAACAAAAGCAGCTTTCAGCACCGAAAACTGGGAGTTGCTATGGGATCCCCAAGTAGCCCACTTAAGCTGGGATCACGTTCCTATTACTGAGGGTGAGCTTAGAATCTTTGGCAATGCGATCTTGAAAGCTAAGTTGAGTAAAACCGACGAGTACGAAGGCTCAGTGACTAAACCTCCGCTCAGTGACTATGAGTTCTATGATCAACTCAAAATTGAATCATGGAGTTCAGGCAGCAAGGACCTGATTACAGGAATGGTTTATACTGACGGCATAGGGTCGACATGGCGCGGGAATGTCGATGGCAGTGAACTAGTTGAAACTGTCGCTTATGCTGATCGCGCGGATAAATCCATTCTTATGTCGGTTGGCTGTGAAATTACAGACTGGTCGCCGAGTACGAAAAAGTCCGTCGCTAAAGGACAGAAATTTAAATACAATAATGCTATCATGCGTTCTACCACTACTCACTTAGAAGCAGATACTGTATCTAAACCTAGTGAGCAAGGAGCCGGAGTTTATGTATTTGAAAGCCATCATCCCGAAGTAAGTCTTAATAAGCTCATCAAGGCCTCTGACCTTTCAGTGAGTAATGCAGTCGCATCAACAGTCTACTTGTCTCCGGATCAGCACGGTAATATTTACGGAACGGTTTATCGCGTTTACTTTGGTCAATTGACTGATGACCTGACCGAAATTGTAACTGGCATGGGTACAGTCAAGCTCATTAATTCCAGTTTTGAGACCTCAGTATGGGTGTCCGAAGATAGAGGCAGCACAACCGCCAACTATCGAGAGGTACATTCAGGAGTGAACTGGCCATCAGATCCAGTGTTCCGTGTCCGAGCTATTGTTGATCTCACATCCGGAGAAACAGCAAAGATTAAGGTACAGCAAGGTAAGTCAGTCCGCGTAGAATCTGGATGGATTGATTTCACTAGTACGAATTCGGCACTTAAAGATACTGGCGATATCATTAACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bfb2b48e9cc11fb42d4c71f5321df5174548170c7f8285573507f48b25e127b7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5149
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Therapeutic potential of a new jumbo phage that infects the coral pathogen Vibrio coralliilyticus Jacquemot,L., Bettarel,Y., Monjol,J., Corre,E., Halary,S., Desnues,C., Bouvier,T., Ferrier-Pages,C., Van Ngoc,B. and Baudoux,A.-C. 2018-10-24 — GenBank