Protein

View in Explore
Genbank accession
ACE82008.1 [GenBank]
Protein name
gp58-like protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MATSLFDNYKQKLTELQKEKQNAVAVITNNKDLVVYEELNSKFNLQNDKIGLEVSKLWQGVNNVEENTISKIEILDDKITLESERKVEGNPIVNGAFESENIFGWNVGGTNISITTNYTYLGKRNINYINVTPTSINGSSSWSNRFSILPSTEYTLSGLFFTGISTKLGIKVKFSNSIKEGNDFEKEGKFDEEINLGNWISEDDSFIPKHFTFITPANAKSAFLEFYYYEATNYCGWTEIMLTKGKQPSSYVSKTASYSKVFQQLTPDSIINSVNKGLAEGGAISVASTILDENGFSQLNRGKLSVKLNNNGTHIYSFLQDDKINGSLQALRNVVTGDDVVGLTNEKGAYAQIAYRGDGSNYYNYMRFDKEGLTQPTPITVYEEFDMNGLNMFFNKKNQESRIFGYLDSRNRGSVALYTNNFGFWSNDGSGHSLLTLDRDVANFYNRVIIGGDLSVIGNKNCIQQTKFGDVPFYANEDINSLLTETDTDTIYTTELVEDKYICRIEIDEIIQECINTTLHYNVYIDKLSWGDYKVEVREKDYFIVESDREMKFKYKLEGKRKGFEHENKENNFMQKATVQKPSQETETPSIQKREKEIIHKKPINEFWELYRCNNCN
Physico‐chemical
properties
protein length:617 AA
molecular weight: 70409,77900 Da
isoelectric point:5,15640
aromaticity:0,11669
hydropathy:-0,57326

Domains

Domains [InterPro]
DC_1054
STR
1–617
DC_1054
Coil
Unmapped
6–26
Coil G3DSA:2.60.120.260
ACE82008.1
1 617
Architecture
STR
STR 1-617
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ACE82008.1
1 617
Domain Start End Length (AA) Confidence
N-terminal 1 133 133 0,6928
Central domain 134 343 211 0,4951
C-terminal 344 617 273 0,7746
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-133
Central
134-343
C-terminal
344-617

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage phiCP39-O
[NCBI] 		541865 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Clostridium perfringens
[NCBI] 		1502 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Eubacteriales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACE82008.1 [NCBI]
Genbank nucleotide accession
EU588980 [NCBI]
CDS location
range 22255 -> 24108
strand +
CDS
ATGGCGACAAGTTTATTTGATAATTACAAACAAAAACTAACCGAGCTACAAAAAGAAAAACAAAATGCGGTTGCGGTTATAACTAATAATAAAGATTTGGTTGTCTATGAAGAATTGAATTCTAAATTCAATCTTCAAAACGACAAAATCGGTTTAGAAGTTTCTAAACTATGGCAAGGTGTTAACAATGTAGAGGAAAATACGATTTCAAAAATAGAAATATTAGATGATAAAATAACTTTGGAATCGGAAAGAAAAGTGGAAGGGAATCCAATAGTAAACGGTGCTTTTGAAAGTGAAAATATATTTGGTTGGAATGTTGGAGGGACAAATATATCGATAACAACTAATTATACTTATTTAGGTAAAAGAAATATAAATTATATAAATGTTACACCAACATCAATTAATGGTAGTTCTAGTTGGAGTAATAGATTTTCTATTTTGCCATCAACCGAATATACTCTATCAGGATTATTTTTTACAGGAATATCTACAAAATTAGGAATAAAAGTTAAATTCTCTAACTCTATAAAAGAAGGTAATGACTTCGAAAAAGAAGGGAAATTTGATGAAGAAATAAACTTAGGAAATTGGATTTCAGAAGATGATTCATTTATACCTAAACATTTTACATTTATTACGCCCGCTAATGCTAAAAGTGCATTTTTAGAATTTTATTACTATGAAGCTACAAATTATTGCGGTTGGACTGAAATAATGCTAACTAAAGGTAAACAACCTTCTAGTTATGTAAGTAAAACCGCTTCATATTCTAAAGTTTTTCAACAATTAACACCTGATTCAATTATAAATAGTGTAAACAAAGGTCTTGCAGAGGGTGGAGCTATAAGTGTTGCGAGTACGATTTTAGATGAAAACGGATTTTCTCAACTTAACAGAGGTAAATTGTCAGTAAAATTAAACAATAACGGAACTCATATTTATAGTTTTTTACAAGATGATAAAATAAATGGTTCTTTACAAGCGTTGAGAAATGTTGTTACTGGTGATGATGTCGTTGGATTGACAAACGAAAAAGGGGCATATGCGCAAATTGCTTATAGAGGTGACGGTTCTAATTATTACAATTATATGCGTTTTGATAAAGAAGGGCTTACACAACCGACACCTATAACGGTTTATGAAGAATTTGATATGAATGGATTAAATATGTTTTTTAATAAAAAGAATCAAGAAAGTAGGATATTTGGTTATTTAGATAGTAGGAATAGAGGAAGTGTAGCTTTATATACTAACAATTTTGGATTTTGGTCGAACGATGGTAGCGGACATTCTCTTCTTACTTTAGATAGAGATGTAGCAAACTTTTATAATAGAGTTATAATAGGTGGAGATTTATCTGTAATAGGCAATAAAAATTGTATTCAACAAACAAAATTTGGTGACGTTCCTTTCTATGCGAACGAGGATATAAACTCTTTGCTAACGGAAACTGATACAGATACAATTTATACAACTGAATTAGTAGAGGATAAATATATTTGTAGAATAGAGATAGATGAAATAATACAAGAATGTATTAATACCACGCTACATTACAACGTTTATATAGATAAACTTAGTTGGGGGGATTATAAAGTTGAGGTTAGAGAAAAAGATTATTTTATAGTTGAATCTGATAGAGAAATGAAATTTAAATATAAATTAGAAGGGAAAAGAAAAGGGTTTGAGCATGAAAATAAAGAAAATAATTTTATGCAAAAAGCTACAGTCCAAAAACCTTCTCAAGAAACTGAAACACCATCGATACAAAAAAGAGAGAAAGAAATTATCCATAAAAAGCCGATTAATGAATTCTGGGAGTTATATCGTTGCAATAATTGTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
06ce71b8eeb81e44c9d2c002894afaa591e3b5f3a9af9a90c65113b19036bdd6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6240
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Clostridium perfringens bacteriophages PhiCP39O and PhiCP26F: genomic organization and proteomic analysis of the virions Seal,B.S., Fouts,D.E., Simmons,M., Garrish,J.K., Kuntz,R.L., Woolsey,R., Schegg,K.M., Kropinski,A.M., Ackermann,H.W. and Siragusa,G.R. 2011 20963614 GenBank