Protein

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Genbank accession
AKU43562.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MTDTIEEICNTSISLTQLQAGYTLFDLPATDGFVIRDLIVSNVKNRRVILMRNSALWRVVDASMALSGTEILPKGSEVTAQYTGSPIFNGFQSVGQNGVSVTTTNTIFDDGLPKTNTSILVGMAPVTTVGNSPVISTPLTLTPIFQYLASNGDFYYASDAGVCYRRAGGVNGAQTSIFSGNPVGAITVDPVTGIMYAYHNNSGNNIIYRHNTTNNTPLSSITPDTAPYTASSGNPTRLAVAAYNNVLYVGTYSNNTIWVINATTGALITSFAVSASPGSQRPQMRFHKTKDDNVYFTYVHATDGMSVYSIAGGNPATAPGSPVLVAMAMNIFNNAIYTRLVSLVGTDYVLAYDGTSFQFINLTNKTFFTQTSATPGNTYILQSTSGYDAARASADFGSVVVEVQGVRFN
Physico‐chemical
properties
protein length:409 AA
molecular weight: 43562,28330 Da
isoelectric point:5,76634
aromaticity:0,10024
hydropathy:0,04425

Domains

Domains [InterPro]
IPR015943
STR
95–391
IPR015943
IPR011044
ATT
145–317
IPR011044
IPR011044
ATT
149–317
IPR011044
AKU43562.1
1 409
Architecture
STR
ATT
STR
STR 95-144 | ATT 145-317 | STR 318-391 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AKU43562.1
1 409
Domain Start End Length (AA) Confidence
N-terminal 1 99 99 0,6763
Central domain 100 306 208 0,5209
C-terminal 307 409 102 0,8000
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-99
Central
100-306
C-terminal
307-409

Taxonomy

  Name Taxonomy ID Lineage
Phage Caulobacter phage Seuss
[NCBI] 		1675601 Uroviricota > Caudoviricetes > Seussvirus >
Host Caulobacter crescentus
[NCBI] 		155892 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Caulobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKU43562.1 [NCBI]
Genbank nucleotide accession
KT001914 [NCBI]
CDS location
range 31951 -> 33180
strand +
CDS
ATGACCGACACGATTGAAGAAATCTGCAACACCTCGATCTCTCTGACTCAGCTCCAAGCCGGATATACGCTTTTTGATCTTCCTGCGACCGATGGTTTTGTCATTCGAGACCTGATTGTCTCGAATGTGAAGAACCGCCGAGTGATCCTCATGCGGAACTCAGCCCTCTGGCGCGTCGTGGACGCCTCCATGGCTCTGTCGGGTACGGAGATCTTGCCGAAGGGGTCTGAGGTCACTGCTCAATACACAGGCTCGCCGATTTTCAATGGCTTTCAAAGTGTCGGACAAAATGGTGTCTCGGTCACCACGACGAACACGATTTTCGACGATGGCCTGCCTAAGACCAACACCTCTATACTAGTAGGTATGGCTCCAGTGACTACCGTGGGTAACTCCCCGGTGATCTCTACACCTCTAACTCTAACGCCTATTTTCCAATACCTCGCCAGTAATGGCGACTTCTATTACGCCTCCGACGCTGGGGTATGTTATCGCCGGGCCGGGGGCGTCAACGGCGCTCAAACCTCTATCTTCTCAGGTAATCCTGTCGGGGCTATAACAGTAGACCCTGTTACTGGGATCATGTACGCCTATCACAATAATAGCGGTAATAATATTATCTATCGGCATAATACCACGAACAATACGCCGCTTTCTAGTATAACTCCAGACACAGCTCCCTACACCGCCTCCAGCGGCAATCCGACAAGGTTAGCTGTCGCAGCGTATAACAACGTTCTGTACGTTGGAACATACAGCAATAATACAATCTGGGTCATCAATGCCACTACTGGTGCTTTGATTACCAGCTTCGCCGTCTCAGCATCCCCCGGTTCTCAGCGACCTCAGATGCGTTTCCATAAGACGAAAGACGATAATGTCTACTTTACCTATGTGCATGCCACAGACGGTATGAGTGTCTACTCTATTGCTGGGGGTAATCCGGCGACTGCGCCTGGGAGCCCCGTCCTAGTTGCTATGGCGATGAACATTTTCAATAACGCAATTTACACCCGGTTAGTTTCATTGGTCGGCACAGACTACGTACTGGCATATGACGGTACAAGCTTTCAATTTATCAATCTCACGAACAAGACTTTCTTTACCCAAACGTCAGCCACCCCTGGTAACACCTATATTCTGCAAAGCACCTCTGGTTACGATGCCGCGAGAGCCTCAGCTGATTTCGGGTCAGTGGTTGTTGAGGTACAAGGTGTTCGCTTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
52b2a3488733a4ee5af102bb5a1bf544d18f4adc323ef21cd8ed07c92cc63d19
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6110
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Caulobacter crescentus Siphophage Seuss Sloan,J.M., Keene,J.L., Cahill,J.L., Rasche,E.S. and Kuty Everett,G.F. 2015 26430045 GenBank
The Complete Genome of Caulobacter crescentus Siphophage Seuss Sloan,J.M., Keene,J., Cahill,J.L., Rasche,E.S. and Everett,G.F.K. 2015-10-29 — GenBank