Protein

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Genbank accession
YP_010582105.1 [GenBank]
Protein name
minor head protein
RBP type
TF
Evidence RBPdetect2
Probability 0,84
Protein sequence
MADVEKRKIKLRRGQEADLPTLDEGEPALTLDTNKFFIGGTTGNIQLANQKDLETLSSSVDSVKEDISTAQTDISGLKTDVTTTKEDVSKLQTDVSTVKTDLDTAEGNIGSLQTDMTAAKADVSTLKTDMTTAKSDISTLKSDVGNAKSDVSTLKSDMTTAKSNISSLQTDTGSLQTDVGGLKNLISSSNGAVDVGDADMDATIKGKEKVSIVAPVLNVFSRETYHQGNFCNHAIFSSSEAVAPATLPKDTYTDLTAVLDTVDSAFPAGSASAAAYTVPREGVYSFNVTVKVTTAVTAAAGYIRFGLKQSRGETVTDLDIQDVHYSNAFGTPLLSATFIYKCVAGDVITPVIKPLTEDITVDTGSKCSIYFLGDSIQA
Physico‐chemical
properties
protein length:378 AA
molecular weight: 39824,90920 Da
isoelectric point:4,59546
aromaticity:0,05026
hydropathy:-0,18016

Domains

Domains [InterPro]
DC_0212
STR
1–341
DC_0212
IPR041352
ATT
9–39
IPR041352 cd21116
G3DSA:1.20.5.340
STR
38–114
G3DSA:1.20.5.340 G3DSA:1.20.5.190 G3DSA:1.20.5.190
SSF57997
STR
51–177
SSF57997
YP_010582105.1
1 378
Architecture
ATT
STR
ATT 1-39 | STR 40-341 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage SPG24
[NCBI] 		1497851 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus subtilis
[NCBI] 		1423 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010582105.1 [NCBI]
Genbank nucleotide accession
NC_030903 [NCBI]
CDS location
range 147926 -> 149062
strand +
CDS
ATGGCAGACGTAGAAAAAAGAAAGATCAAACTTCGTAGAGGGCAGGAGGCAGACTTACCAACCCTTGATGAGGGGGAGCCTGCCCTTACGTTAGATACTAACAAGTTCTTTATCGGAGGTACGACTGGGAACATCCAACTAGCCAATCAAAAAGACTTGGAAACTCTATCAAGCAGTGTAGACAGCGTAAAAGAGGACATCAGCACAGCCCAGACGGATATCAGCGGTTTAAAAACAGATGTAACTACTACTAAAGAAGACGTTTCTAAATTACAGACAGACGTATCTACAGTCAAGACAGACTTAGACACCGCAGAAGGTAACATCGGGTCTCTTCAAACAGATATGACCGCAGCTAAGGCAGATGTATCCACATTAAAGACAGACATGACTACAGCAAAGTCGGACATCTCTACTTTGAAGTCTGATGTAGGTAATGCAAAATCAGATGTATCTACTCTAAAGTCGGATATGACTACAGCAAAATCAAACATATCTTCTTTGCAGACGGACACCGGGTCTTTACAGACGGACGTAGGTGGTCTTAAAAACCTCATCAGCTCTAGTAACGGGGCAGTGGATGTGGGGGACGCTGATATGGATGCCACAATTAAGGGTAAAGAAAAGGTATCAATTGTGGCTCCTGTACTAAATGTATTCTCTAGAGAAACATACCATCAAGGGAACTTTTGCAATCATGCAATATTCTCCAGCTCTGAGGCTGTCGCACCTGCTACACTGCCTAAAGATACCTATACTGATCTTACAGCGGTTCTAGACACCGTAGATTCCGCATTCCCCGCCGGATCAGCTTCGGCAGCAGCATATACAGTACCGAGAGAAGGTGTTTACTCCTTCAACGTTACGGTTAAAGTAACGACAGCGGTAACGGCTGCAGCAGGGTACATTCGGTTCGGATTGAAACAAAGTAGAGGAGAGACTGTAACAGACCTTGATATTCAAGATGTACACTACTCTAATGCTTTCGGTACCCCTTTATTGAGTGCAACCTTTATTTATAAGTGCGTTGCGGGAGACGTTATCACACCAGTAATAAAGCCGCTGACCGAGGATATCACAGTAGATACAGGTTCGAAATGCAGTATCTACTTCCTCGGAGACAGCATTCAAGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f9487b57ead5f90df3399df0d324acfbd32d70f1c8a0cde12011bb3ca3b88df6
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8787
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome of SPG24 was analyzed in behalf of its correct identification and originality Lee,O.H. 2021-03 — GenBank