Protein

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Genbank accession
XCO38900.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MASTVITYPLNDSRQYRIPFEYLSRKFVEVRLKKQSGETGPLLVNLQHYRFADKTTIVLFPDINTDGYTSVELRRNTSATDRVVDFSDGTVLRASDLNTSQTQAIHIVEEVRGQTISDMTELAELSKLYRDQAMSYRDEAKGFSDVAEEARDATIEAILKAGDKSTLAYLALPEGAGAIGLQEGGRLSDIVDEYTLDALGVVDFSDASTKLEQIVAWQALTGYKIRQSVPRRYTLSGNKKYYFTHGVDLSGVTWVPDSTFKGVVGYKGPDEVRLYDSSTPEGAALLEKINSSSSKSKAAQSAILDGLIGDTTLNGCYVQFKGPDVLFTARGNPKTWVHTTRMSRDGQMDHAMKYSFSSITSVRALPVRTSGGYTKVNLGVIDMRNSPHNGAGMLEILNGSRIEVEGMGVINKPTIDTASNVLIKLDTGWNVRVKDYYDQWPNDSWSSGSRVYSYGLNFNNMVGLHVINFDSQGAGWGTTAGADCTDTTFEGCNLNRVDFHSPFWGYLRVIRCHLGNHAFSVRGCGDRLSIKDCKVTFHPGGVDNGILKGRDDQGGFMDCDLEIDGLVIDGELDADLGMLRSGDDGTGGVPAGSPVTPRFFRNVSIRNVRWQARKETARFANLISASRDGSVWFPESVTLENFDFNSGDDDGSALTIGFTNFKQKRDFDNTANPLTVPFTTHIKMTDVSASRVLIRGAGVSHNPRVVIENLRDLRAGKMGSTLEITQRGSYKVSDSQIKKLYLSSTFTGMASPNGYCDVELVNTDLVNPTESPIGNIQDLHSISMTGGNLMAPFGGTSDTSIARAIARAMTLRGVTLRGPDGAQLANAPLWSGSIGSTETPIDGDLQVRWGNRLSVTSYIDSTPNVASLFVEGTTAWHTLFARSATNTSPIRLDLRARTGRSLFNSVIGTPEGVRTINITGG
Physico‐chemical
properties
protein length:921 AA
molecular weight: 100352,28240 Da
isoelectric point:5,92088
aromaticity:0,08143
hydropathy:-0,30076

Domains

Domains [InterPro]
DC_0474
STR
1–624
DC_0474
IPR005604
ATT
5–119
IPR005604 DC_1183
XCO38900.1
1 921
Architecture
ATT
STR
RBD
ATT 1-119 | STR 120-624 | RBD 625-918 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO38900.1
1 921
Domain Start End Length (AA) Confidence
N-terminal 1 233 233 0,9136
Central domain 234 850 618 0,9810
C-terminal 851 921 70 0,9026
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-233
Central
234-850
C-terminal
851-921

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage phi1_146022
[NCBI] 		3232202 Viruses >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO38900.1 [NCBI]
Genbank nucleotide accession
PP889472.1 [NCBI]
CDS location
range 36143 -> 38908
strand +
CDS
ATGGCAAGCACAGTTATCACCTACCCATTAAATGATTCTAGGCAGTACCGCATCCCGTTTGAGTACCTTTCTCGTAAGTTTGTCGAGGTTCGCCTGAAGAAACAGAGCGGAGAGACGGGACCACTTCTTGTGAACCTTCAGCACTACAGGTTTGCAGATAAGACAACCATAGTGTTATTCCCGGACATCAATACAGACGGTTATACCAGTGTGGAGCTTCGCCGGAACACTTCTGCTACAGACCGGGTCGTTGACTTCTCTGACGGTACGGTACTTAGAGCTTCCGACCTAAACACCTCACAGACACAGGCAATTCACATCGTGGAGGAGGTTAGGGGGCAGACCATATCTGACATGACCGAACTTGCGGAACTGTCGAAACTCTACCGGGACCAAGCCATGTCCTACCGAGATGAGGCGAAAGGTTTCTCCGATGTAGCAGAGGAGGCTAGGGATGCTACTATAGAGGCGATACTGAAGGCAGGGGACAAATCCACCCTTGCATACTTGGCCTTACCGGAGGGCGCTGGGGCGATAGGCCTCCAAGAGGGGGGTCGGCTATCAGACATCGTCGATGAGTACACTCTAGACGCCCTTGGGGTAGTAGACTTTTCTGATGCCTCGACTAAGTTAGAGCAAATCGTTGCATGGCAAGCACTTACTGGATATAAAATACGCCAGTCTGTACCCCGTCGTTACACATTAAGTGGTAACAAGAAGTATTACTTTACTCACGGCGTGGATTTATCAGGGGTGACTTGGGTTCCAGATTCTACGTTCAAAGGAGTCGTTGGGTACAAGGGGCCTGATGAAGTTCGGCTGTATGACTCATCCACCCCCGAAGGTGCGGCTCTTCTGGAAAAGATTAACTCATCCAGTTCAAAGTCCAAGGCGGCGCAGTCGGCTATTCTGGACGGCCTCATTGGCGATACGACACTGAATGGTTGCTATGTGCAGTTTAAAGGCCCTGACGTGCTCTTCACTGCGCGAGGCAATCCGAAGACGTGGGTGCACACAACCCGTATGTCCAGAGACGGGCAGATGGACCACGCCATGAAGTACAGCTTCAGCTCCATTACTTCGGTCCGAGCCCTCCCGGTTAGAACCTCTGGCGGGTACACGAAGGTGAACCTAGGGGTCATCGACATGCGCAACTCCCCACACAATGGGGCGGGAATGTTGGAGATACTAAATGGTTCTCGGATCGAGGTTGAGGGGATGGGTGTTATAAACAAGCCAACCATAGACACCGCGTCTAACGTCCTCATAAAGTTGGACACAGGGTGGAACGTTCGTGTCAAGGACTACTATGACCAGTGGCCCAACGACTCGTGGTCGTCAGGTTCCCGAGTGTATAGCTACGGACTCAACTTCAACAACATGGTAGGGCTCCATGTGATCAACTTCGACTCTCAAGGGGCCGGATGGGGGACCACCGCAGGGGCAGACTGTACGGATACCACCTTCGAGGGATGCAACCTCAATAGGGTCGACTTCCACTCCCCATTCTGGGGATACCTACGGGTAATCCGATGCCATCTGGGCAACCATGCGTTTTCTGTACGTGGCTGTGGTGACAGACTCAGTATCAAGGACTGTAAGGTCACCTTCCATCCGGGTGGCGTCGATAACGGAATCCTGAAGGGCCGAGACGACCAAGGCGGTTTCATGGACTGTGACTTGGAGATTGATGGACTTGTAATTGATGGGGAACTTGATGCTGACTTAGGAATGCTCAGAAGTGGCGATGATGGTACAGGTGGCGTGCCAGCAGGCTCACCAGTTACGCCAAGATTCTTTAGGAACGTAAGTATCCGCAACGTAAGATGGCAGGCAAGGAAGGAGACAGCTAGATTCGCCAACCTTATAAGTGCGTCAAGAGATGGTTCGGTTTGGTTCCCGGAGTCTGTGACTTTGGAGAACTTCGATTTTAACAGTGGGGATGATGATGGTTCAGCATTGACCATCGGATTCACAAACTTTAAACAGAAGAGGGACTTCGACAATACCGCCAACCCGCTCACAGTACCATTTACCACCCACATTAAGATGACGGACGTATCAGCTTCTCGCGTCCTGATTCGAGGGGCTGGTGTTTCTCACAACCCTAGGGTGGTAATAGAGAATCTCCGCGATTTGCGCGCTGGTAAGATGGGGAGTACGCTAGAGATAACCCAGCGTGGGTCCTACAAGGTGTCCGACTCTCAAATCAAGAAACTGTACCTGTCGTCAACCTTTACTGGAATGGCTTCACCAAACGGGTATTGCGACGTTGAGTTGGTCAATACCGACCTTGTAAACCCCACAGAGTCCCCAATCGGAAACATTCAGGACCTGCACAGCATCTCGATGACTGGCGGGAACCTCATGGCTCCATTTGGTGGAACTTCTGACACGTCAATTGCTAGGGCTATAGCTAGGGCTATGACTCTTCGCGGCGTAACGCTACGGGGACCTGACGGCGCGCAGCTTGCCAATGCACCACTTTGGAGCGGCTCTATAGGGTCCACAGAGACTCCTATTGATGGGGACCTTCAGGTGAGATGGGGGAATAGACTGTCGGTTACCAGTTATATAGACTCCACTCCCAACGTGGCTTCCCTTTTCGTTGAGGGGACAACGGCGTGGCACACCCTCTTTGCAAGGAGCGCCACAAATACGTCGCCAATCCGTTTGGACCTTAGGGCGAGAACCGGGAGGAGCTTATTTAACTCCGTAATCGGGACGCCTGAGGGAGTTCGTACCATAAACATTACAGGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
05739e12509b889d0385d14f6bc615c6996cc5d570c0ccda0f35c3d9bc28c3d2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6773
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The complete genome of Klebsiella pneumoniae phages Fang,Q., Luo,H., Feng,Y. and Zong,Z. 2016-02 — GenBank