Protein

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Genbank accession
YP_009203992.1 [GenBank]
Protein name
hinge connector of long tail fiber protein distal connector
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MADLKSNSTVGGSPIWHKGNFPLFPTGDTLLFKTYKVYTEKDKPQAIDNDFVSKAQGGTYAESVRFSKGLTFNDKQGNPVTLGVPKSTSPDITYKASLQVTGPFALETPDGQPFVIFDPDKTNGVYRLITMGNVLGNEVYDSSGRTFSPGNPPTKTQVGLPLVDNAKQVQLQNSTLQTMSGPLAAPNFFSNLPATENGHVPRFDQIVIKDSIQDFGYYS
Physico‐chemical
properties
protein length:219 AA
molecular weight: 23793,37000 Da
isoelectric point:6,09623
aromaticity:0,10502
hydropathy:-0,43059

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009203992.1
1 219
Domain Start End Length (AA) Confidence
N-terminal 1 198 198 0,9869
Central domain 199 208 11 0,1003
C-terminal 209 219 10 0,8839
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-198
Central
199-208
C-terminal
209-219

Taxonomy

  Name Taxonomy ID Lineage
Phage Citrobacter phage Merlin
[NCBI] 		1675602 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Moonvirus
Host Citrobacter freundii
[NCBI] 		546 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009203992.1 [NCBI]
Genbank nucleotide accession
NC_028857 [NCBI]
CDS location
range 158588 -> 159247
strand +
CDS
ATGGCCGATTTAAAATCAAACAGTACAGTCGGTGGTTCACCTATTTGGCATAAGGGCAATTTCCCTCTATTTCCAACCGGTGACACGCTGCTCTTCAAAACATACAAGGTTTATACCGAAAAAGATAAACCTCAGGCTATAGACAACGATTTCGTTTCTAAAGCACAAGGCGGAACTTATGCAGAATCCGTTAGATTCAGTAAAGGCCTAACCTTTAATGACAAGCAGGGTAATCCAGTGACACTTGGGGTTCCCAAGAGCACTAGCCCTGATATAACATATAAAGCTTCACTTCAAGTTACTGGTCCATTCGCTCTGGAAACACCAGACGGTCAACCATTCGTTATCTTTGACCCAGATAAAACTAATGGAGTATATCGTCTTATTACTATGGGTAATGTACTTGGTAATGAGGTGTATGATTCAAGCGGACGTACATTTTCTCCTGGTAATCCACCAACTAAAACACAAGTAGGTTTACCACTGGTAGATAATGCTAAGCAAGTACAATTACAAAATTCTACTCTTCAAACAATGAGTGGTCCTTTAGCTGCTCCTAATTTTTTTAGTAATTTGCCTGCAACAGAAAATGGCCACGTTCCACGCTTCGATCAAATCGTTATAAAAGATTCAATTCAAGACTTCGGATATTATAGCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
17507269a5514b54502a581b8d7f6e50adf0c69eee022350ecd16b256282a713
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6228
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50