Protein

View in Explore

Genbank accession

APD24412.1 [GenBank]

Protein name

tail fiber protein and host specificity

RBP type

Evidence Phold

Probability 1,00

Evidence RBPdetect2

Probability 0,93

Protein sequence

MLLTIHDANLQKVAFVDNDKQGTLNYYDDTWTRSLLTGSSTFEFTVFKKSIKSDNALQKAYSYLNERAWVSFKYHGKSFLFNVMQVEEDEQTIKCYCENLNLELINEIANPYKANKAMSFAEYCEVMDLLNHTRLSIGINEISDYKRTLEWEGQETKLARLLSLANKFNAEIEFDTQLEADSTIKKFSVNIYHENDEKHQGVGRIRSDIQLKYGKNVKSIRRKVDKTGIFNTIRPTGKRRVKNGKGEEVEEIVTLKGLDAWSVKNDRGIVEFYQRNESLYAPISMQLYPSTFSHGTADDQWTRKDFSYDTDDPKELHRLGYNELKKHCYPAITYEVDGFVDADIGDTVKAYDDDFSPFLIVKARVTDQKISFSNPTNNKTIFSNFKALENQLSDGIQEAFERLFEAAKPYTIKLSTDNGVIFKNQIGQSLVTPTLYKGGKPVVVGVTWRWALDGEVTTGMTYLVRGSNVTDTVTLTVAAYIGNKEVAVDEISLVNVADGKLGTPGTPGRDGRTPYVHTAWANNATGTDGFSLDSSINKLYIGIYTDFEPNDSTDPKKYKWAKVKGDKGEKGDKGEPGQRGLDGLQGARGEQGLPGRNGADGRTQYTHIAYSNSADGTKDFSVSASDRAYIGMYVDFNSADSNTPSDYNWTLVKGADGANGVAGKAGTDGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDYRVYKWTLIKGADGTGISNVTNYYLATTVSTGITRTSAGWTTTPQPITSDKRYLWNYRVELYTNGTSKTTEPTVIGVHGEKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDYRVYKWTLIKGADGTGISNVTNYYLATTVSTGITRTSAGWTTTPQPITSDKRYLWNYRVELYTNGTSKTTEPTVIGVHGEKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYLHIAYATSNNGSQGFSTTDSTNKTYIGTYTDYTQADSTDPKKYKWAKVKGDKGEKGDKGERGLQGLQGLQGARGEQGIPGPRGADGRTQYTHMAYADNATGGGFSQTNTDKAFVGVYIDFNPTDSRNPADYRWTRWKGRDGANGVAGRAGADGRTPYVHFAYSENADGSGLTMTDNGQRYFGHYSDYEKPDSSDKTKYKWADRWAKVDGGYVNIYALSKNRSIGKSYHVSEFNMDVLSGNITLKAIGSDPYIGAVSSHPGIFIKQQGMKIPVIQGRSICITITNPLFRKNYISFFNSLGKTVKTYKHYNTNKFLISSADLVGVEFIALRYGAGSSNIQIGTVLETKVKVEYGTVHSDWSPAPEDIESNINSKADQGLTQEQLNALNEKSQILEAEMKAKASMEAFSELEKAYNAFVKSNADSRKKSESDLVEAGRRIDLLTTQFGGLAEIKTFIDTYMKSTNEGLIIGKNDASSTIKVSSDRISMFSAGKEVMYISQGVINIDNGIFTASIQIGRFRTEQYHLNKDVNVIRYIGG

Physico‐chemical properties

protein length:	1803 AA
molecular weight:	198280,49930 Da
isoelectric point:	8,29046
aromaticity:	0,10704
hydropathy:	-0,69118

Domains

Domains [InterPro]

DC_0120
STR
1–591

DC_0120 DC_1151 G3DSA:1.20.5.320 DC_1328 DC_0921

IPR010572
ENZ
145–386

IPR010572 IPR050149 Coil

DC_1151
STR
579–742

DC_1151 G3DSA:1.20.5.320 DC_1328 DC_1328

APD24412.1

1 1803

Architecture

STR

STR 1-1802 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0120	STR	DC_0120	1	591	Novel HMM	DC_0120	Central	Low	Positional only	28 proteins / 28 hits
IPR010572	ENZ	DC_0675	145	386	InterPro cluster	Tail spike domain	Central	High	Text match	419 proteins / 419 hits
IPR050149	Unmapped	-	499	1421	InterPro	Collagen superfamily	-	-	-	-
DC_1151	STR	DC_1151	579	742	Novel HMM	DC_1151	Central	Low	Positional only	27 proteins / 27 hits
DC_1151	STR	DC_1151	721	958	Novel HMM	DC_1151	Central	Low	Positional only	27 proteins / 27 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	791	847	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_1328	STR	DC_1328	939	1093	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
G3DSA:1.20.5.320	STR	G3DSA:1.20.5.320	1010	1066	Merged direct domain	G3DSA:1.20.5.320	Central	Low	Positional only	67 proteins / 67 hits
DC_1328	STR	DC_1328	1089	1250	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
DC_1328	STR	DC_1328	1246	1408	Novel HMM	DC_1328	Central	Low	Positional only	136 proteins / 136 hits
DC_0921	STR	DC_0921	1402	1802	Novel HMM	DC_0921	Central	Low	Positional only	77 proteins / 77 hits
Coil	Unmapped	-	1650	1670	Coils	Coil	-	-	-	-

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Streptococcus phage IPP65 [NCBI]	1916201	No lineage information
Host	Streptococcus pneumoniae [NCBI]	1313	cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Lactobacillales

Coding sequence (CDS)

Genbank protein accession

APD24412.1 [NCBI]

Genbank nucleotide accession

KY065501.1 [NCBI]

CDS location

range 29501 -> 34912
strand +

CDS

ATGCTTTTAACAATTCATGATGCAAACTTACAAAAGGTGGCATTTGTTGACAATGATAAACAAGGCACATTGAATTATTATGACGACACATGGACTAGAAGTCTGCTTACAGGTTCATCAACATTTGAGTTTACTGTATTTAAAAAATCTATTAAGTCAGACAATGCATTACAAAAAGCCTATTCGTACCTTAATGAACGAGCCTGGGTATCTTTCAAATATCATGGTAAGAGTTTTCTTTTTAACGTTATGCAAGTTGAGGAGGATGAACAGACTATCAAATGCTATTGCGAGAACCTCAATCTTGAGTTGATAAACGAGATAGCAAATCCTTATAAAGCTAATAAGGCAATGAGCTTTGCGGAATACTGCGAGGTTATGGATTTATTAAACCATACTCGTCTTTCCATCGGCATTAATGAAATTTCAGATTACAAACGTACTCTTGAATGGGAGGGGCAAGAAACAAAACTTGCCCGCTTGTTGAGCCTTGCTAACAAGTTCAATGCTGAGATTGAGTTTGATACACAATTAGAAGCTGATAGCACTATCAAAAAGTTTAGTGTTAATATCTATCATGAAAACGACGAAAAACATCAAGGTGTAGGTCGGATAAGAAGTGATATACAACTAAAATATGGCAAGAATGTCAAATCAATCCGTCGCAAGGTTGATAAAACAGGTATTTTTAATACGATTAGACCAACTGGTAAAAGACGAGTTAAGAATGGAAAAGGCGAAGAAGTCGAGGAAATTGTAACATTAAAAGGCTTAGATGCTTGGTCTGTTAAGAATGATAGAGGTATTGTTGAATTTTATCAACGAAACGAGTCACTGTATGCGCCTATCTCAATGCAACTATATCCATCAACATTCTCACATGGCACAGCTGATGATCAATGGACAAGAAAAGATTTTAGCTACGACACTGACGATCCAAAAGAACTACATCGTCTGGGTTATAACGAGCTTAAAAAACATTGTTATCCAGCAATTACTTATGAAGTTGATGGTTTTGTCGATGCTGACATTGGTGATACAGTCAAGGCTTATGATGATGACTTTAGTCCTTTCTTGATTGTCAAGGCACGAGTTACTGACCAGAAAATCAGTTTTTCCAATCCAACAAACAACAAAACAATATTTTCAAACTTTAAAGCCCTTGAAAATCAATTATCAGACGGCATACAAGAGGCTTTTGAGAGATTATTTGAGGCTGCTAAGCCATATACTATTAAATTATCAACGGACAATGGTGTTATCTTTAAAAATCAGATCGGCCAGAGTCTAGTAACCCCAACCTTATACAAGGGAGGAAAACCAGTCGTTGTTGGTGTTACTTGGCGATGGGCACTTGATGGAGAAGTAACAACAGGGATGACTTACTTAGTTAGAGGCTCAAATGTAACTGATACAGTTACTCTGACAGTTGCAGCTTACATTGGAAATAAAGAGGTTGCTGTTGATGAGATATCGCTTGTTAATGTTGCTGATGGAAAACTTGGTACACCTGGAACTCCAGGGCGAGATGGCCGTACTCCTTATGTCCATACAGCATGGGCTAATAATGCAACAGGAACAGATGGATTTAGTCTTGATAGCTCAATCAATAAACTCTATATTGGTATTTATACAGACTTTGAACCAAACGATAGCACAGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGAGACAAGGGAGAAAAAGGCGATAAAGGAGAACCGGGACAACGTGGTTTAGATGGCTTGCAAGGTGCAAGAGGTGAACAAGGATTACCTGGTCGCAATGGTGCAGATGGCCGTACTCAATACACTCACATAGCTTACAGCAATAGCGCTGATGGAACTAAGGATTTTTCTGTAAGCGCCTCTGATAGAGCTTATATCGGTATGTATGTTGATTTTAATAGTGCTGATAGTAATACTCCATCTGATTACAATTGGACACTTGTAAAAGGAGCTGATGGCGCAAACGGCGTGGCAGGTAAGGCTGGTACAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAATGGATCACAAGGTTTTTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGCACAGATTACAGAGTGTATAAGTGGACGTTGATAAAAGGGGCAGATGGTACTGGTATTTCTAATGTAACTAATTATTATTTAGCTACTACAGTCTCAACAGGTATCACAAGAACAAGCGCAGGGTGGACAACTACGCCACAGCCTATCACATCAGACAAGCGTTATTTATGGAATTATCGAGTTGAGCTATACACAAACGGTACAAGTAAGACAACAGAGCCTACTGTTATTGGTGTGCACGGGGAAAAAGGAGAACGTGGATTGCAAGGTTTACAAGGCTTGCAAGGCGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGTGCAGATGGTCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGCACAGATTACAGAGTGTATAAGTGGACGTTGATAAAAGGGGCAGATGGTACTGGTATTTCTAATGTAACTAATTATTATTTAGCTACTACAGTCTCAACAGGTATCACAAGAACAAGCGCAGGGTGGACAACTACGCCACAGCCTATCACATCAGACAAGCGTTATTTATGGAATTATCGAGTTGAGCTATACACAAACGGTACAAGTAAGACAACAGAGCCTACTGTTATTGGTGTGCACGGGGAAAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGTGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGTCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAATGGTTCACAAGGTTTTTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGTACCGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGATAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGCGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGTCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGGGTGTATATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGGACACCATACTTACACATAGCTTACGCCACATCAAATAACGGCTCACAAGGCTTCTCAACTACTGACAGTACAAATAAAACGTATATCGGAACATACACAGATTACACTCAGGCAGATAGTACCGACCCTAAAAAATACAAGTGGGCTAAAGTAAAAGGGGACAAGGGAGAAAAAGGCGATAAAGGAGAACGTGGATTACAAGGTTTACAAGGCTTGCAAGGCGCACGAGGTGAACAAGGTATTCCTGGACCTAGAGGGGCAGATGGCCGTACACAATATACTCACATGGCCTATGCCGATAACGCAACAGGTGGTGGATTCAGTCAAACAAACACTGACAAAGCCTTTGTTGGAGTGTACATTGACTTTAATCCAACAGACAGCAGAAATCCTGCTGATTATCGCTGGACAAGATGGAAAGGTCGTGATGGCGCAAATGGCGTGGCAGGTAGGGCTGGTGCAGATGGTAGAACGCCTTATGTTCACTTTGCGTATTCTGAAAATGCAGATGGATCAGGTTTGACAATGACAGATAACGGACAGCGTTATTTTGGTCATTATTCAGATTATGAGAAACCTGATAGTTCGGATAAAACTAAGTACAAATGGGCTGATCGTTGGGCTAAAGTTGATGGAGGTTATGTAAATATCTATGCATTGTCTAAGAATAGAAGTATTGGGAAATCTTATCATGTTTCTGAATTTAATATGGATGTACTTTCAGGAAATATCACTCTAAAAGCAATTGGGTCAGATCCATACATTGGCGCCGTTTCTTCTCATCCAGGTATTTTTATAAAGCAACAGGGAATGAAAATCCCAGTTATACAAGGGAGATCTATTTGTATAACAATAACAAATCCTTTATTTAGAAAAAATTACATCTCGTTTTTTAATTCATTAGGTAAAACTGTTAAAACATATAAGCATTACAACACAAATAAATTTTTAATATCTTCAGCTGATTTGGTAGGTGTTGAATTTATCGCTTTACGATATGGTGCAGGAAGCTCGAATATACAAATTGGAACCGTACTAGAGACAAAAGTAAAGGTAGAATATGGAACCGTGCATAGCGACTGGTCGCCCGCTCCAGAAGATATTGAAAGTAATATTAACTCTAAAGCTGATCAGGGTCTGACTCAAGAGCAGTTAAATGCCCTCAATGAGAAGTCACAAATTTTAGAGGCTGAAATGAAAGCGAAAGCATCGATGGAGGCCTTTAGTGAATTAGAAAAAGCATATAATGCCTTTGTGAAATCAAATGCAGATAGTCGAAAAAAATCTGAGTCTGATTTAGTTGAAGCAGGTAGAAGAATTGATTTGCTGACGACACAATTTGGAGGATTAGCAGAGATTAAAACATTCATTGATACTTACATGAAAAGCACAAATGAGGGCTTGATTATAGGTAAGAATGATGCAAGCTCTACTATTAAGGTATCAAGTGATAGAATATCCATGTTTTCTGCAGGTAAGGAAGTTATGTACATTTCGCAAGGTGTAATAAATATTGATAATGGTATTTTTACTGCATCAATTCAAATTGGACGTTTTAGAACAGAACAGTATCATCTTAACAAAGATGTGAATGTCATACGATATATAGGAGGTTAA

Genome Context

Tertiary structure

PDB ID

c1a70578255a12420bff6c26473cbf6a7b4a21c0d81b53592381bfb8126143fe

ColabFold

Source ColabFold

Method ColabFold

Resolution 0,7591

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence