Protein
View in Explore- Genbank accession
- CAB4184215.1 [GenBank]
- Protein name
- Bacteriophage P22, Gp10, DNA-stabilising
- RBP type
-
TSP
- Protein sequence
-
MPDFGFVGTSYEAPSIYQDAQECINFFAEIDPQKLPGQRGIVALYPTPGLEKQLQLNAAEVRGMRALSGGNYLVVVCGSTVYSVNLAMTATIIGSLASSFGQVSISDNVTTNDGLTAYIVDGENRYTWVASTNTFTTLPPSDGPWQGAAIVDVVDNYNIYNEPDTQNWACTDLGSSLSTQALYGVKDGSPDNLVSMIVDRRQVYLLGEVTSEVWTDVGNVITGITTFPFQRVPGTSMQSGCAAKFSVARFNDSFVFVAKDTRGNSTIEAIVGYSFKRLSTHAVEQTLVNQIVSDAVAYTYQIEGHEFYVCTFPSIGTGLTWVYDLSTSAWHKWLSFADGQYYRHRSNCGAYFNNMYLVGDYENGKIYSIENEVYTEDGATIRRLRRAPHLVVDFQREYFDELQIQFQPGVGLNAYPAYDAEDLATESGNIIVAEFVQGYLTTQAGDQLVTEAGDGNEPLVTQVQPAEDYNGYALETEVYTAAPGYDPQAMLRWSNDGGSTWSNEHWTSIGKIGRYTNRAIWRRLGLARDRIFEVSISDPVKAVIISANLKSSVGEN
- Physico‐chemical
properties -
protein length: 556 AA molecular weight: 61229,27550 Da isoelectric point: 4,52117 aromaticity: 0,11691 hydropathy: -0,19820
Domains
Domains [InterPro]
DC_0229
STR
1–556
STR
1–556
IPR021098
STR
47–396
STR
47–396
1
556
Architecture
STR 1-556
Legend:
ATT
STR
RBD
CBM
LEC
ENZ
CHP
LNK
TAS
TTP
UNK
Unmapped
Tail Spike Domain Segmentation
Tail Spike Domain Segmentation
This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.
Domain Layout
1
556
| Domain | Start | End | Length (AA) | Confidence |
|---|---|---|---|---|
| N-terminal | 1 | 363 | 363 | 0,8579 |
| Central domain | 364 | 545 | 183 | 0,4572 |
| C-terminal | 546 | 556 | 10 | 0,9959 |
Note: Constraints were applied during segmentation.
Fixed 60 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Fixed 60 C-terminal predictions appearing before Central domain|C-terminal too short, adjusted boundary
Legend:
N-terminal
Central domain
C-terminal
3D Structure with Domain Coloring
The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).
Domain Coloring
N-terminal
1-363
1-363
Central
364-545
364-545
C-terminal
546-556
546-556
Taxonomy
| Name | Taxonomy ID | Lineage | |
|---|---|---|---|
| Phage |
uncultured Caudovirales phage [NCBI] |
2100421 | Uroviricota > Caudoviricetes > Peduoviridae > Maltschvirus maltsch > |
| Host | No host information | ||
Coding sequence (CDS)
Coding sequence (CDS)
Genbank protein accession
CAB4184215.1
[NCBI]
Genbank nucleotide accession
LR797056
[NCBI]
CDS location
range 20974 -> 22644
strand +
strand +
CDS
ATGCCGGATTTCGGATTTGTTGGAACATCTTATGAAGCACCAAGCATCTATCAAGATGCTCAGGAGTGCATCAATTTCTTTGCGGAAATAGACCCGCAAAAACTCCCTGGCCAGCGCGGGATTGTGGCGCTATATCCGACACCGGGACTTGAAAAGCAATTGCAACTTAATGCCGCAGAAGTGCGCGGTATGCGTGCGCTATCGGGTGGTAATTATCTTGTTGTTGTTTGCGGCAGCACTGTTTACAGCGTCAATCTGGCAATGACAGCAACTATTATCGGTTCGCTTGCAAGCAGTTTTGGTCAGGTGTCGATTTCTGACAATGTAACCACCAACGATGGATTGACTGCTTATATTGTTGATGGTGAAAATCGGTATACATGGGTAGCCAGCACCAATACGTTTACGACGTTGCCGCCTAGTGACGGTCCGTGGCAAGGTGCTGCAATCGTTGATGTGGTTGATAATTACAACATTTACAACGAGCCAGATACTCAAAACTGGGCTTGCACTGATCTTGGATCAAGTCTTTCTACGCAAGCGCTTTACGGCGTGAAAGATGGTTCGCCTGATAATTTAGTAAGCATGATTGTTGACCGTCGGCAGGTTTATCTGCTGGGCGAAGTTACCAGCGAAGTATGGACGGATGTGGGAAATGTGATCACCGGCATCACAACTTTTCCGTTTCAGCGCGTGCCAGGCACCTCGATGCAGTCAGGGTGCGCTGCTAAATTTAGCGTGGCGCGGTTCAATGATTCGTTTGTTTTTGTAGCAAAAGACACACGCGGGAATAGCACTATTGAGGCAATCGTTGGTTATTCTTTTAAACGATTGAGCACGCACGCGGTTGAGCAAACGCTAGTCAACCAGATTGTTTCAGATGCGGTGGCATACACCTATCAGATCGAAGGCCACGAGTTTTACGTATGCACATTTCCAAGCATTGGCACCGGACTCACATGGGTTTATGATTTATCAACCTCGGCATGGCACAAATGGCTGTCTTTTGCCGATGGTCAATATTATCGGCACCGCAGTAATTGCGGGGCTTATTTCAACAATATGTATCTCGTTGGCGATTATGAGAATGGCAAAATCTATTCTATCGAAAACGAGGTTTATACCGAGGATGGCGCAACTATCCGGCGTTTGCGTAGAGCGCCGCATTTAGTAGTTGATTTTCAGCGAGAGTATTTCGACGAGCTGCAAATTCAGTTCCAACCTGGCGTTGGCTTAAATGCGTATCCTGCTTACGATGCCGAAGATTTAGCCACAGAATCCGGTAATATCATTGTGGCCGAGTTTGTGCAGGGTTATCTGACTACGCAAGCCGGTGACCAGTTAGTCACCGAGGCCGGTGACGGTAATGAACCGTTGGTGACCCAAGTGCAACCTGCCGAGGATTACAACGGCTATGCGCTGGAAACCGAAGTCTATACAGCAGCGCCGGGTTACGATCCGCAAGCCATGCTGCGCTGGTCAAATGACGGTGGCAGCACTTGGTCAAACGAACACTGGACGAGCATAGGTAAAATCGGCAGATATACCAACCGAGCAATCTGGAGACGTTTAGGGTTGGCGCGAGATCGAATCTTCGAGGTTTCTATCAGCGATCCTGTTAAAGCAGTAATTATTTCGGCAAATTTGAAGTCATCTGTTGGTGAAAACTGA
Genome Context
Genome Context
Tertiary structure
PDB ID
e5588a466cbec9a65d43209660072185148ec0ca616ff828c8a2609c335e40ec
Model Confidence
Very high
pLDDT > 90
pLDDT > 90
High
90 > pLDDT > 70
90 > pLDDT > 70
Low
70 > pLDDT > 50
70 > pLDDT > 50
Very low
pLDDT < 50
pLDDT < 50