Protein

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Genbank accession
VOH53496.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MPYTIKRYSSVNGGSSKPNKTVNDIQIDNTYSSIGLIGSYNESYKSQFFQNMLWKMENFSHTIAPLNPIEGQLWFNPDEKSVKVYISNDKPTSVSSDWKNLGSTILNELTDHESRTGINDPHETTKEQVGLGNVPNVYTFNKTLNLADVLDASICRSNLEVYGTSETYNKTTVNNLFMTKGGTVNNTDRLDGLTSADFVLVDNPVVYRTFDTTSIITNTALTYNNSKGSIVVNTGAGNIDLLSGIRSDGRIASANDTGAMLSFINDNSDPIVTMVLFNRATANNQTAQPVKSYRFTKTNLIIDYDTNPSEMYHTGRIPSNAAVGSLPLNGKAVNTLLLNGIYQSSSPNDNAVVLRDGAGDVHARHIQVSNPDENIETGNLILFRNSNTSDNYVRRANVSSFQSWFRANEPKGVVKAWIQFNGITGSTYKSHNCTLTKLGTGKYRIYYNSFSTPAAGSVVPFVGVTSDGQISTGMAAGTGRLSYNSSLVYLRSTTYTDLEFFRTYNINYNNYSLDSFTNVYADANNITFTWFF
Physico‐chemical
properties
protein length:532 AA
molecular weight: 58686,29930 Da
isoelectric point:6,19218
aromaticity:0,10526
hydropathy:-0,39286

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
VOH53496.1
1 532
Domain Start End Length (AA) Confidence
N-terminal 1 229 229 0,8640
Central domain 230 428 200 0,2199
C-terminal 429 532 103 0,9941
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-229
Central
230-428
C-terminal
429-532

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_MIJ3
[NCBI] 		2567864 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
VOH53496.1 [NCBI]
Genbank nucleotide accession
LR588166.1 [NCBI]
CDS location
range 6175 -> 7773
strand -
CDS
ATGCCTTACACTATTAAACGTTATTCATCTGTCAACGGCGGCTCTTCTAAACCAAATAAAACCGTTAACGATATACAAATAGACAATACGTACTCTTCTATTGGACTAATAGGATCGTATAATGAATCTTACAAAAGTCAGTTCTTCCAAAATATGCTATGGAAGATGGAAAATTTTAGTCATACTATTGCTCCGTTAAATCCGATAGAAGGTCAATTATGGTTTAATCCAGATGAAAAAAGTGTTAAAGTTTACATAAGTAATGATAAACCTACGTCTGTTTCTTCCGATTGGAAAAATCTAGGATCTACTATTTTAAATGAGCTAACAGATCACGAATCAAGAACAGGTATTAACGATCCCCACGAGACAACAAAAGAACAAGTGGGATTGGGAAATGTTCCTAATGTTTACACATTTAACAAAACATTAAATCTTGCAGATGTATTAGATGCATCTATATGCCGATCTAATTTAGAAGTATACGGGACTTCAGAAACTTACAATAAAACTACTGTAAACAATCTTTTTATGACAAAAGGTGGTACAGTAAATAATACTGACAGATTAGATGGCTTAACTAGTGCTGATTTTGTCCTTGTAGACAACCCTGTTGTTTATAGAACGTTCGATACAACCAGTATAATCACTAATACTGCGTTAACATATAATAACTCTAAAGGTTCTATAGTAGTTAACACAGGTGCAGGAAATATAGATTTGTTGTCTGGAATAAGGTCAGACGGAAGAATTGCATCTGCAAACGATACCGGTGCTATGTTATCGTTTATTAACGATAATAGTGATCCTATAGTTACTATGGTTTTATTTAATCGTGCTACTGCAAACAATCAAACAGCACAACCAGTAAAATCATATAGATTTACAAAAACTAATTTAATAATAGACTACGATACTAATCCTAGTGAAATGTATCATACAGGAAGAATACCGTCTAACGCTGCTGTCGGTTCACTTCCACTAAACGGAAAGGCTGTCAATACACTATTATTAAATGGCATTTATCAATCTAGCAGTCCAAATGACAATGCAGTTGTATTAAGAGATGGTGCAGGAGATGTACATGCTAGACACATTCAAGTTTCTAATCCAGACGAAAACATAGAAACAGGAAATTTAATTCTATTTAGAAATTCAAATACAAGCGATAACTATGTTAGACGAGCAAATGTCTCTTCATTCCAGTCGTGGTTTAGGGCTAACGAACCTAAAGGTGTAGTTAAAGCTTGGATACAATTTAACGGAATAACAGGTTCTACTTATAAGTCACATAACTGTACATTAACTAAACTAGGTACAGGGAAATATAGAATATATTACAATTCATTTTCTACGCCTGCTGCGGGTTCTGTTGTTCCGTTTGTAGGAGTTACTAGTGACGGTCAAATATCTACTGGTATGGCTGCTGGCACTGGGAGACTTAGCTACAATTCATCATTGGTATATTTAAGAAGCACTACTTATACAGATTTAGAATTCTTCAGAACATACAATATTAATTATAATAACTATTCTTTAGATTCGTTTACTAATGTATACGCAGACGCTAACAACATAACATTTACATGGTTCTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
96ebf51eef405209a70e682214b0f0f6664c20c905808aa71239bf0e67f58dae
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5747
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50