Protein

View in Explore
Genbank accession
QIG75796.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSTQEMELIRGSKGGGKGKGGGGSNAENTLRSKARVRMVEVISEGPCVGLIDSLGNVLGSSVYGKGVHFEQTPVINENNSRNFQNVIIAQRLGYPDQAHLTGFPQVETPFAVDTQVKANTGPVVRTINEENADSVRVIVKLPALVKQNKKTGKLGTASVSYAIDVRGYQGSWQRAHTENLVNQKCTSAVQRAHRIELPLGGHPWDIRVVRLTEDSDSDTLSNDTIFESYTVVVEGKFTYPHTALVATEVNAEDMGQSVPARNYRYRGLIISVPSNYNPITRTYTGFWDGTFKQAWTNNPAWIFYDLLTNDRYGLGEFVSPQIVDKWSLYQIAQYCDEQVKSGFKNADTGLPIYEPRYTYNGVLRSREDAWRVLQQISTAWRGMAYWSLGQVFATADMPSDPVKLFSPANVVGDFNYSGTSQKARHTVALVGYNNPDDFYRPDVEPVPHEEGLRRWGWREKQVTLAGCTSRGLAHRYGKWILDVEQNETETVDFSASWDSTDVRPGDIIAIADPNKAQIRLGGRLKAAEETQLWLDGPFVPAAGETYQVYVTLPTGQVQLCDISHFANELFKDGESIGYDRIVLAEPLAELPLVNSMWVMRGTDVQPRLYRIITIKEDKKNIFKITALFHDPNKYARVENIGSLQPTSYTRPKTESLPVENLQVHEVSYLENGLPKSTLTLSWSNPRDFLTKEYEVAMLSPTSGYNVVGTTQNNSIDITDLPIGEYTFYVYAISFSSVRSQPSTLVYEIAGWAVAAAPTVSNLQLEDSEDGVHFSGSTANISWFNNFPVTTSVTAEGAAVANVRSPFYDFNTVKVWDTTTGTLLRTQKVESSTYGYTIEMNTADTKRAGLAGPTRTLRFDVTVTDTLARESNPATISVSNPTPAAFNPTAFVAVNNIHLSWPAPVDTDFAGVLVWVETNDTFDPYATTPRYDGAGGAFVFPGEELQTYYVRAAAYDSFGKTGLNISPALMVSTTALFETDPPAIPTGLAVTTSFVDGVARVSATWDANAETDVVAYDFAFKQGSSNWVALPVAQNSFAFDAVPGVLYEVKVRARDRLGNVSDYCAAVTISAVVDTVAPSVPLNVGAVGLFRSVWLDWDLSPESDVDFYEVEASKGGLVTIYFCKAPAFIHSSLAVGDGWSYRVRAVDTSANRSDWSGVVTAIVGAINPGDLTPDAVVSTFALIDEAFIESAHIVELDAGKIKAGSILSGNVIVATSSGDIPLSDIGVGGNPAETINNGVTQIEPGKIKIASGVSLADWRYGGDNTQINGGALAANTVHANVLTIGMRGIATDGLNFEHNSPAINSVSWTSGTIRYIGDDGNTASRAITAGNAAWTAGFLYLVWAKGANALTATTDPAVAFGANAVILALYLGGKDLTANYGRTTIDGSNIKTGTVTATAMAVSSLSAISANIGTVTSGLMQSSDGKMQIDLTNKRILIAD
Physico‐chemical
properties
protein length:1439 AA
molecular weight: 155739,38460 Da
isoelectric point:5,01538
aromaticity:0,09521
hydropathy:-0,14524

Domains

Domains [InterPro]
IPR053171
Unmapped
9–749
IPR053171 DC_1241 IPR013783 IPR013783
DC_0129
STR
24–822
DC_0129 IPR003961 IPR036116
IPR055385
ATT
106–234
IPR055385 IPR032876 IPR003961 IPR003961 IPR036116
IPR003961
STR
657–745
IPR003961 DC_1500
IPR003961
STR
1077–1152
IPR003961
QIG75796.1
1 1439
Architecture
STR
ATT
STR
ATT
STR
ATT
STR
RBD
STR 24-105 | ATT 106-234 | STR 235-365 | ATT 366-519 | STR 520-822 | ATT 870-977 | STR 978-1169 | RBD 1170-1435 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QIG75796.1
1 1439
Domain Start End Length (AA) Confidence
N-terminal 1 12 12 0,9667
Central domain 13 211 200 0,0506
C-terminal 212 1439 1227 0,0460
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-12
Central
13-211
C-terminal
212-1439

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y2_17_1
[NCBI] 		2509590 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG75796.1 [NCBI]
Genbank nucleotide accession
MN988548.1 [NCBI]
CDS location
range 43791 -> 48110
strand +
CDS
ATGAGCACTCAGGAAATGGAGCTCATTCGCGGCTCAAAGGGCGGTGGCAAGGGTAAGGGCGGTGGTGGCTCGAACGCAGAGAATACGCTGCGCTCGAAGGCGCGCGTGCGCATGGTCGAGGTTATCTCCGAAGGCCCCTGTGTCGGCCTGATCGACAGTCTCGGCAATGTGCTCGGCTCGAGCGTCTACGGCAAAGGCGTGCATTTCGAGCAGACGCCCGTCATCAACGAAAACAACAGCCGGAACTTCCAGAACGTCATCATCGCGCAGCGTCTCGGCTATCCCGACCAGGCGCACTTGACGGGCTTCCCGCAGGTCGAGACGCCGTTTGCGGTCGACACCCAGGTCAAGGCCAACACCGGCCCGGTCGTGCGCACCATCAACGAAGAAAACGCCGACTCCGTGCGCGTCATCGTCAAGCTGCCGGCGCTCGTCAAGCAGAACAAGAAGACCGGCAAGCTCGGCACCGCATCGGTCTCCTATGCGATCGACGTGCGCGGTTATCAGGGCAGCTGGCAGCGCGCCCACACCGAGAACCTGGTCAACCAGAAATGCACCTCGGCCGTCCAGCGCGCCCACCGGATCGAGCTGCCGCTCGGCGGTCATCCCTGGGATATCCGCGTTGTCCGCCTGACCGAAGACAGCGACAGCGACACGCTCTCCAACGACACGATCTTTGAGAGCTACACGGTCGTCGTCGAGGGCAAGTTTACCTACCCGCACACCGCGCTTGTTGCGACCGAAGTCAATGCCGAGGACATGGGTCAGTCGGTGCCGGCGCGTAACTATCGCTACCGCGGCCTGATCATTTCCGTGCCGTCGAACTACAATCCGATCACCCGCACCTATACCGGCTTCTGGGACGGCACGTTCAAGCAGGCCTGGACCAATAACCCGGCCTGGATCTTCTATGACCTCCTGACCAATGATCGCTACGGCCTTGGCGAGTTCGTCTCTCCCCAGATCGTCGACAAGTGGTCGCTCTACCAGATCGCCCAGTATTGCGACGAGCAGGTCAAATCGGGCTTCAAGAACGCCGACACCGGTCTGCCGATCTATGAGCCCCGCTATACCTATAATGGCGTCCTGCGGTCGCGTGAGGACGCATGGCGCGTGCTCCAGCAGATCTCGACGGCCTGGCGCGGCATGGCCTACTGGTCGCTCGGCCAGGTGTTTGCGACGGCCGACATGCCGTCCGACCCGGTTAAGCTGTTCTCGCCTGCCAACGTCGTCGGCGACTTCAACTATTCCGGCACCTCGCAGAAGGCGCGCCACACGGTCGCGCTTGTCGGCTACAACAATCCAGACGACTTTTATCGCCCGGACGTCGAGCCCGTTCCGCACGAAGAAGGGCTTCGCCGCTGGGGCTGGCGCGAGAAGCAGGTCACGCTCGCCGGCTGCACGTCGCGTGGCCTGGCGCACCGCTATGGCAAATGGATCCTCGATGTCGAGCAGAACGAGACCGAGACGGTCGATTTCTCGGCATCCTGGGACTCGACCGACGTGCGGCCGGGCGACATCATCGCGATCGCCGATCCGAACAAGGCGCAGATCCGCCTGGGTGGCCGTCTGAAGGCTGCCGAGGAGACCCAGCTCTGGCTGGACGGCCCCTTCGTGCCAGCTGCCGGCGAGACCTACCAGGTCTATGTCACCCTGCCCACCGGCCAGGTGCAGCTCTGCGATATCTCCCACTTCGCCAACGAGCTGTTCAAGGATGGCGAGAGCATCGGTTATGACCGCATCGTGCTGGCCGAGCCGCTCGCCGAGCTGCCGCTGGTCAACTCGATGTGGGTTATGCGCGGCACCGATGTGCAGCCGCGCCTCTACCGCATCATCACCATCAAGGAAGACAAGAAGAACATCTTCAAGATCACGGCGCTGTTCCATGATCCGAACAAATATGCCCGCGTCGAGAATATCGGCTCGCTGCAGCCGACCTCCTACACCCGCCCGAAGACCGAAAGCCTGCCGGTCGAGAACCTGCAGGTTCACGAGGTCAGCTATCTCGAAAATGGGCTGCCCAAATCGACGCTGACGCTCTCCTGGTCGAATCCGCGTGACTTCCTGACGAAGGAATATGAAGTCGCGATGCTCTCGCCCACGAGCGGCTATAACGTCGTGGGCACGACGCAGAACAACTCGATCGACATCACCGATCTGCCGATCGGCGAATACACCTTCTACGTCTACGCCATCAGCTTCTCCTCGGTGCGTTCGCAGCCGTCGACGCTGGTCTATGAAATCGCTGGCTGGGCAGTTGCCGCAGCACCGACCGTCTCGAACCTCCAGCTCGAGGACAGCGAAGACGGCGTGCATTTCTCCGGCTCGACGGCCAACATTTCCTGGTTCAACAACTTCCCGGTCACGACCTCCGTCACGGCCGAGGGCGCGGCTGTCGCCAATGTCCGCAGCCCGTTCTACGACTTCAACACGGTCAAGGTTTGGGATACGACCACGGGCACGCTGCTGCGCACGCAGAAGGTCGAAAGCTCGACCTACGGCTACACCATCGAAATGAATACGGCCGACACCAAGCGCGCGGGACTGGCCGGCCCTACGCGCACGCTGCGCTTCGACGTCACCGTTACCGACACGCTGGCGCGAGAGAGCAATCCTGCGACGATCTCGGTCTCCAACCCGACGCCGGCCGCTTTCAACCCGACGGCCTTCGTTGCCGTCAACAACATTCATCTGTCCTGGCCGGCGCCGGTCGACACCGACTTTGCCGGCGTCCTGGTCTGGGTCGAAACCAACGACACCTTCGATCCCTATGCGACCACGCCGCGTTACGACGGCGCCGGTGGCGCGTTCGTCTTCCCTGGCGAGGAGCTGCAGACCTACTATGTCCGCGCTGCCGCCTACGATAGCTTCGGCAAGACCGGTCTGAATATCTCGCCGGCGCTCATGGTCTCGACGACGGCTCTGTTCGAAACTGATCCGCCTGCGATCCCGACCGGCTTGGCCGTCACGACGAGCTTCGTCGATGGTGTTGCTCGTGTGTCTGCGACCTGGGACGCCAACGCTGAGACCGATGTCGTCGCTTACGACTTCGCGTTCAAGCAGGGCTCGAGCAACTGGGTCGCCCTGCCGGTGGCGCAGAACTCGTTCGCATTCGATGCTGTGCCGGGCGTGCTTTACGAGGTCAAGGTCAGGGCGCGCGATCGTCTGGGCAATGTCTCGGACTACTGCGCGGCCGTCACGATCTCGGCCGTCGTCGACACCGTCGCGCCTTCCGTGCCGCTGAATGTCGGCGCCGTCGGCCTGTTTCGCTCTGTCTGGCTGGACTGGGATCTGTCGCCGGAAAGCGACGTCGATTTCTACGAGGTCGAGGCGTCCAAGGGCGGCCTGGTGACAATCTATTTCTGCAAGGCTCCGGCGTTCATTCACTCCTCGCTGGCCGTCGGCGATGGATGGAGCTATCGCGTGCGCGCCGTCGACACTTCTGCGAACCGAAGCGACTGGAGCGGCGTCGTGACGGCGATCGTCGGCGCCATCAATCCTGGCGATCTGACGCCTGACGCGGTGGTTTCGACCTTCGCGCTTATCGATGAAGCCTTCATCGAGAGCGCGCACATCGTCGAGCTGGACGCCGGCAAGATCAAGGCTGGCTCTATTCTGTCGGGTAACGTGATCGTTGCAACGAGCAGCGGAGATATTCCGCTGTCGGATATCGGCGTGGGTGGCAATCCTGCCGAAACCATCAACAATGGGGTCACCCAGATTGAGCCGGGCAAGATCAAGATCGCAAGCGGTGTCTCGCTTGCCGATTGGCGTTATGGTGGCGACAATACGCAGATCAACGGCGGGGCGCTGGCTGCCAACACGGTTCATGCCAACGTGCTGACGATCGGCATGCGTGGCATTGCGACTGATGGCCTGAATTTCGAGCATAACAGCCCGGCGATCAACAGCGTCTCCTGGACTAGCGGCACGATCCGTTACATCGGCGACGACGGTAATACGGCCAGCCGGGCGATCACGGCCGGCAATGCTGCCTGGACGGCTGGCTTCCTCTATCTCGTGTGGGCGAAGGGCGCAAACGCGCTCACGGCAACCACCGACCCGGCTGTCGCCTTCGGCGCCAATGCCGTCATCCTGGCTCTCTACCTGGGCGGCAAGGATCTGACGGCTAATTACGGCCGCACGACGATCGACGGTTCGAACATCAAGACCGGCACCGTTACGGCGACGGCAATGGCAGTTTCGTCGCTGTCGGCAATCTCGGCCAACATCGGCACGGTCACCTCGGGTCTGATGCAGTCGTCGGACGGCAAGATGCAGATCGACCTGACCAACAAACGCATTCTGATCGCGGATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6a4aac23789b3791014460a5cca1740027e2c125b956b72ee57a3e0c80046ab4
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank