Protein

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Genbank accession
XEN21862.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MPLPSLTGNPIKYGKVTWTGLVSAMDSLDEDDNPDIDAITGTIIFKPSAPYLKSPSSTPKFTVALMNRQVNIADAQIDEQGRKYIKLEASVGDVQPDSFTWTAVFNLAYKGVFVTIPNATFQLLEGQEIDLTDHIPPADSAAPTSPMVNDVFIARSQAVAARDEAIEARDEAVEAVSGIPTEVLTIPVADATYAPTYGAILAASYGVSPSATRAENVARLQAAVNAAIAAGKNLILPTTGPGETIKVDAPVTIGGAGGIEIQTPGRCVFDQSVREAVFKVSAPNVIIRPGFEFIGQGLDMTGSGGPLEYVRFAAVWIDGGSHGARVYNMKATGFHRALRIDASLTETPEVVPNLRDIIVDGVLAVDCWTGVSVAGVTDLALSNIRGNYKKAFATDDTDTAQPPHLIYIIDRESVGRLNYNVSIRQCHAWDGADGAAYALKGIRGYSYDGLFARNCEGILDLINLTDGKAGSAVSIDDVYPAAGARASVAIKNSVRAEVRAVVTAKTGNYGRLLYVEGGTEDSFIDVDLTVNKTTAVTGNNNGVGRVSGKRNEVRARVTNLGASMQAALSVSSSGSERNTIHDPVTAGSFRYPIELLQGYNHVVEYDARRLVPDAVAGAGATSVFVDAGAVRPLLRNRAVGDVLGTGWFDNFNRADGASLTSTTDGQAYTMLNGAKFTTVGNASFCNLANTGGAFALPAGGTPNGTWRIVIGTPGVGTDGFIFRTDYAPAGGSAFPVDGIRLGYNTSGSDARPRLQTRLGGGSWTTVATAPNGTAAVAGSEFVITASGTAITVTLDGTSILTYTDNDHGSRVASGLFVNTPAANQWKIDEIQFTPAA
Physico‐chemical
properties
protein length:836 AA
molecular weight: 87510,95880 Da
isoelectric point:5,01180
aromaticity:0,07536
hydropathy:-0,01603

Domains

Domains [InterPro]
DC_0959
STR
120–663
DC_0959
IPR011050
STR
204–455
IPR011050 G3DSA:2.60.120.560
G3DSA:2.60.120.560
RBD
650–826
G3DSA:2.60.120.560
XEN21862.1
1 836
Architecture
STR
RBD
STR 120-663 | RBD 664-826 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XEN21862.1
1 836
Domain Start End Length (AA) Confidence
N-terminal 1 213 213 0,9891
Central domain 214 643 431 0,9963
C-terminal 644 836 192 0,9517
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-213
Central
214-643
C-terminal
644-836

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Berries
[NCBI] 		3241721 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XEN21862.1 [NCBI]
Genbank nucleotide accession
PP978880 [NCBI]
CDS location
range 10923 -> 13433
strand +
CDS
ATGCCTCTGCCTAGCCTAACGGGCAACCCGATCAAATACGGTAAGGTCACATGGACTGGCCTTGTGTCCGCAATGGACTCTCTCGATGAGGACGACAATCCAGACATCGACGCGATCACCGGCACGATTATCTTCAAGCCGAGTGCGCCGTACCTGAAGTCTCCTTCGTCCACTCCGAAGTTCACCGTCGCACTGATGAACCGTCAGGTCAACATCGCCGACGCGCAGATTGACGAGCAGGGTCGCAAGTACATCAAGCTGGAAGCGAGCGTCGGCGATGTACAGCCCGACTCCTTCACATGGACTGCGGTGTTCAACCTCGCATACAAGGGCGTATTCGTCACCATCCCGAACGCAACCTTCCAGCTCCTGGAAGGCCAGGAGATCGACCTCACCGACCACATCCCGCCAGCGGACTCGGCAGCCCCGACGTCGCCAATGGTCAACGATGTATTCATCGCTCGCAGCCAGGCCGTCGCAGCCCGCGACGAGGCGATTGAGGCGCGCGACGAGGCGGTAGAAGCGGTGTCGGGCATCCCGACTGAAGTTTTGACCATACCGGTCGCCGACGCCACGTATGCCCCGACCTATGGGGCGATCCTCGCCGCCAGCTACGGGGTGTCACCGTCGGCGACCCGCGCCGAGAACGTCGCCCGGTTGCAGGCGGCGGTGAATGCGGCGATCGCGGCGGGCAAGAACCTCATCCTGCCCACCACTGGGCCGGGCGAGACGATCAAGGTCGACGCCCCCGTCACCATCGGCGGCGCGGGCGGTATCGAGATTCAAACCCCAGGCCGGTGCGTGTTCGACCAGTCGGTGCGCGAGGCTGTGTTCAAGGTGTCCGCGCCGAACGTCATCATCCGGCCTGGCTTCGAGTTCATCGGGCAGGGCCTCGACATGACCGGCTCAGGCGGTCCGCTGGAATACGTGCGATTCGCGGCGGTGTGGATCGACGGCGGCTCACACGGGGCGCGTGTCTACAACATGAAAGCCACCGGCTTCCACCGCGCCCTGCGGATCGACGCCTCACTCACCGAAACCCCCGAGGTGGTGCCGAACCTGCGCGACATCATCGTCGACGGCGTGCTCGCCGTGGATTGCTGGACTGGTGTGTCGGTGGCCGGTGTGACCGACCTGGCGCTGTCCAACATTCGCGGCAACTACAAGAAAGCATTCGCTACCGACGACACCGACACCGCGCAGCCGCCGCACCTCATCTACATCATCGACCGCGAATCGGTAGGCCGCCTCAACTACAACGTGTCCATCCGCCAGTGCCACGCCTGGGACGGTGCCGACGGTGCCGCCTATGCCCTCAAGGGTATTCGCGGTTACTCCTACGACGGACTGTTCGCCCGCAACTGCGAGGGCATTCTCGACCTGATCAACCTCACCGACGGCAAGGCTGGGTCGGCGGTCTCCATCGACGACGTGTATCCGGCCGCCGGGGCGCGGGCGTCGGTGGCGATCAAGAACTCTGTCCGCGCCGAGGTGCGGGCTGTGGTGACCGCCAAGACCGGCAACTACGGACGGCTGCTATACGTGGAGGGCGGCACCGAGGACTCGTTCATCGACGTCGACCTCACCGTCAACAAGACGACCGCCGTCACCGGCAACAACAACGGTGTTGGGCGGGTGTCGGGCAAGCGCAACGAGGTGCGGGCACGGGTCACCAACCTCGGAGCCTCCATGCAGGCCGCGCTGTCGGTGTCGTCCTCAGGGTCTGAACGCAACACCATCCACGATCCGGTCACCGCCGGTTCATTCCGGTATCCGATCGAACTGCTGCAGGGCTACAACCACGTCGTCGAATACGACGCCCGCCGCCTGGTCCCGGATGCAGTGGCCGGGGCTGGGGCGACCTCCGTGTTTGTCGATGCCGGTGCGGTGCGCCCGCTGCTGCGCAACCGGGCCGTCGGCGACGTACTCGGCACCGGATGGTTCGACAACTTCAACCGCGCCGACGGCGCCAGCCTGACCTCGACGACCGACGGGCAGGCGTACACCATGCTCAACGGCGCCAAGTTCACCACCGTGGGTAACGCTTCGTTCTGCAACCTCGCCAATACCGGCGGCGCGTTCGCGCTCCCGGCGGGGGGCACCCCGAACGGCACCTGGCGCATCGTGATCGGCACACCCGGTGTCGGCACCGACGGGTTCATCTTCCGCACCGACTACGCCCCAGCGGGCGGGTCTGCGTTCCCGGTCGACGGTATCCGCCTGGGCTACAACACCTCCGGCTCGGATGCGAGGCCCCGGTTGCAGACCCGGCTAGGTGGGGGGTCGTGGACGACGGTGGCGACCGCACCGAATGGGACGGCAGCGGTGGCGGGGTCGGAGTTCGTGATCACGGCCTCCGGCACGGCGATCACGGTGACGTTGGACGGTACGTCGATCTTGACCTACACCGACAACGATCACGGGTCGCGGGTGGCCTCGGGTCTGTTCGTGAACACCCCGGCGGCGAATCAGTGGAAGATCGACGAAATCCAGTTCACCCCGGCCGCCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
f020ad4112810837e6a37c1ad3d8940766309b553c96941e0077c2f3c2300d02
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3056
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50