Protein

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Genbank accession
XYM60272.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MLNNLNQPKGSTIGVLKDGRTIQQAIDQLGYLPKFTGVYDIIITYGQSNSAGEAILSGSTAGFPQPLPASLMYDFTDGTIKPIIQNIVSSNGVASSGHAWGEFANEWYRLSGRGSVVVHCGRGAQTIQALSKGQSNNYYSRMVDGVAAAKARMAAQGLTIGKVYFMFHQGESDMSSFTPFDTYRGLMIQLNDDVVADMGVDLFCNFTVGCPSNRQEYTWATIQNAQRYCTRGRDNMVTVFDGCPSFLLRDGNIGTEGVHYTQRGYNLMGREGARGLWSKESSGITSKTVPDLEMYSKSVAPWAAAQDVNASIRWAGSTNSWALLQRSNDIGRWHPSNINGIRTATDGNSLEFIVADKASNWFNVRASVNRGLVAQGFKATAEIITMDLDYIVKAVVYCDVEFTVNTVTGEIRAMRTRATPGWLGRNITATVVAPGVVNITHGQSSGYAQATYYGSADGTLTAATVSVNCPDSATTRVNCSVTVNDQNPWVAVRIPNVLIKPDTLYDADATIQISGTYAPEF
Physico‐chemical
properties
protein length:521 AA
molecular weight: 56396,65220 Da
isoelectric point:6,32683
aromaticity:0,09405
hydropathy:-0,16987

Domains

Domains [InterPro]
DC_1550
ATT
1–34
DC_1550 SSF52266 DC_1094
IPR036514
STR
40–296
IPR036514
IPR005181
ENZ
40–270
IPR005181
XYM60272.1
1 521
Architecture
ATT
STR
RBD
ATT 1-34 | STR 38-296 | RBD 297-521
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XYM60272.1
1 521
Domain Start End Length (AA) Confidence
N-terminal 1 249 249 0,1638
Central domain 250 448 200 0,3645
C-terminal 449 521 72 0,9938
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-249
Central
250-448
C-terminal
449-521

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebseilla phage AHF00
[NCBI] 		3414247 Viruses > unclassified bacterial viruses >
Host Klebsiella variicola
[NCBI] 		244366 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYM60272.1 [NCBI]
Genbank nucleotide accession
PV402695.1 [NCBI]
CDS location
range 38658 -> 40223
strand +
CDS
ATGTTAAACAATCTGAACCAGCCGAAAGGCTCAACCATTGGTGTGCTCAAGGATGGGCGCACTATCCAACAGGCCATTGACCAGCTAGGGTATCTGCCCAAGTTCACAGGGGTGTACGACATCATCATAACCTACGGTCAGTCCAACAGCGCCGGGGAGGCAATCCTCTCCGGTTCTACCGCTGGGTTCCCTCAGCCACTGCCAGCGTCCCTGATGTATGACTTCACAGACGGGACCATTAAACCAATCATCCAGAACATTGTGAGTTCTAACGGTGTGGCCTCCTCCGGCCACGCTTGGGGTGAGTTTGCTAACGAATGGTACAGACTCTCGGGGAGAGGGTCGGTCGTGGTCCACTGTGGACGCGGTGCTCAGACAATCCAAGCCTTGAGTAAGGGTCAGAGTAACAACTACTACTCTCGCATGGTTGACGGGGTCGCGGCGGCTAAGGCCCGCATGGCCGCTCAGGGGCTGACCATTGGTAAGGTGTACTTCATGTTCCACCAAGGTGAGTCTGACATGAGTTCCTTCACCCCGTTCGATACGTATCGTGGCCTCATGATTCAACTCAATGACGACGTAGTGGCTGATATGGGGGTTGACCTTTTCTGTAACTTCACGGTTGGTTGTCCATCGAACCGTCAGGAATACACATGGGCCACCATCCAGAACGCCCAGCGGTATTGCACACGCGGTCGTGACAACATGGTCACCGTGTTTGACGGCTGTCCTTCCTTCCTGCTCCGTGATGGTAACATCGGGACCGAAGGTGTCCACTACACCCAGAGAGGCTACAACCTAATGGGACGTGAGGGTGCGCGGGGCCTATGGTCTAAGGAGTCTAGTGGTATCACCTCTAAGACCGTCCCAGACCTTGAGATGTACAGTAAGTCTGTGGCTCCTTGGGCTGCTGCTCAGGACGTAAATGCTTCAATCCGCTGGGCTGGCTCCACTAACTCATGGGCTTTATTGCAGCGCTCTAACGACATTGGCCGCTGGCATCCGTCTAACATTAACGGAATCCGAACAGCAACCGATGGTAACTCGCTTGAGTTCATTGTTGCTGACAAAGCGTCTAACTGGTTCAACGTGCGGGCGTCAGTAAACCGTGGACTTGTGGCGCAGGGGTTCAAGGCAACCGCTGAGATTATCACAATGGACCTTGACTACATCGTTAAGGCAGTGGTGTACTGTGACGTCGAGTTCACCGTAAACACAGTTACAGGCGAGATTCGGGCCATGCGTACCAGAGCTACTCCGGGCTGGCTTGGCAGGAACATCACAGCGACTGTGGTAGCACCGGGAGTGGTGAACATCACCCACGGACAGTCTTCTGGGTATGCGCAGGCAACCTACTACGGGTCCGCCGACGGTACACTGACAGCTGCCACTGTGTCGGTGAACTGCCCAGACTCCGCAACCACCCGCGTTAACTGTAGCGTTACGGTGAATGACCAGAACCCTTGGGTGGCTGTTCGAATCCCTAACGTCCTCATCAAGCCGGACACTCTGTACGATGCCGATGCGACCATTCAGATTAGTGGTACGTACGCTCCAGAGTTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a69bf8fc68e42637fdf85d0688e1025daaaf24e8943c02dedc3c1abcdd680932
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7989
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50