Protein

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Genbank accession
AWH15814.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,63
Protein sequence
MSLASQSVKNLKGGISQQPDILRFPNQGEQQINGWSSESQGLQKRPPTKFIKRFGATGSWGSKPLVHLVNRDAVEQYYMVFTGTGLVVVDLKGTTYQVRGYDGYANCPDPRGDLRLITIADYTFVVNRRTVVKMGDALTHPGYPSLTSRALIACRGGQYGRTLSVTANGHLLASYKLPSGVAVEDKLAEMVAAMDAQAILTELAKQVNVKTVTTGISAEVGEAYLVLKGADIQSIKTADGYADQLINGFIYQVQSFNKLPAQAPDGYLVEITGEASRSGDNYWVRYDLKGRVWRETVEPGIIAGFNAQTMPRGLVRAADGHFDWKVLDWADRKSGDNETNPMPSFVDGTINDVFFFRNRLGFLSGENVIMTRSARYFSFFPPSVASLSDDDPLDLAVSHNRISILKYAVPFSEQLLLWSDQAQFVLSSSGILSPKTVELNLTTEFDVQDTARPFGIGRGVYFSAPRAAFTSLKRYYAVQDVSDVKNAEDVSAHVPSYIENRVFNIHGSGTENYVTLLSDGAPGRVYVYKFLYLNEDIAQQSWSHWEFGDDVSILAAASIGSYMYILMDRHEGVVLERVEFTAFTRDFPEEPYRTYIDAKVMTTCTVYDEDLNLSSLNLLDLYGAPPHNTTRFWSIDTDGVSVLHEAPKGGWAADSRLYLQGDQRGRRFVIGRQFLFLYEFSKFLIKQTADDGSITTEDSGRLQLRRAWLNYESSGSFEVNVNNGYAQYVYTMAGGRIGSEVRLGELSLGTGQYKFPVTGNALKHRVALMSDAPNPLNVIGCGFEGNYVRRTNGI
Physico‐chemical
properties
protein length:794 AA
molecular weight: 88062,05050 Da
isoelectric point:5,76719
aromaticity:0,11209
hydropathy:-0,23652

Domains

Domains [InterPro]
IPR058003
TTP
1–794
IPR058003
AWH15814.1
1 794
Architecture
TTP
TTP 1-794
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AWH15814.1
1 794
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,9906
Central domain 147 348 203 0,0509
C-terminal 349 794 445 0,1363
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-348
C-terminal
349-794

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage 67PfluR64PP
[NCBI] 		2163980 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Pfluvirus
Host Pseudomonas fluorescens
[NCBI] 		294 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AWH15814.1 [NCBI]
Genbank nucleotide accession
MH179478 [NCBI]
CDS location
range 12539 -> 14923
strand -
CDS
ATGAGTCTGGCGAGCCAGTCCGTAAAGAACCTGAAGGGTGGCATTAGCCAGCAGCCGGACATCCTCCGGTTTCCCAATCAAGGCGAGCAACAAATCAATGGGTGGTCCTCCGAGAGTCAAGGTCTTCAGAAGCGCCCACCTACCAAGTTCATCAAGCGCTTTGGCGCAACGGGGTCATGGGGTTCCAAGCCCCTTGTCCACCTCGTGAACCGTGATGCGGTCGAGCAGTATTACATGGTGTTCACTGGCACAGGTCTCGTTGTGGTGGACCTCAAAGGGACTACCTATCAGGTCCGTGGATACGATGGCTATGCCAACTGTCCTGACCCTCGTGGGGACCTCCGACTGATCACCATTGCCGACTACACCTTCGTTGTGAACCGCCGCACAGTGGTCAAGATGGGAGACGCCCTGACACATCCGGGCTACCCTTCGCTGACCTCAAGGGCTCTCATTGCGTGCCGTGGTGGACAGTATGGCCGGACCCTTTCGGTCACCGCTAACGGTCACCTCTTGGCTTCCTACAAGTTGCCTTCAGGGGTTGCCGTTGAGGATAAGCTGGCCGAAATGGTTGCTGCAATGGACGCCCAAGCGATCCTCACTGAGCTTGCAAAGCAGGTCAACGTGAAGACAGTCACGACCGGTATCTCTGCGGAAGTGGGTGAAGCCTATCTGGTCCTTAAAGGTGCTGACATCCAGTCGATCAAGACGGCTGACGGCTACGCTGACCAGTTGATCAACGGCTTTATCTATCAGGTTCAGTCGTTCAACAAGCTGCCCGCTCAGGCCCCTGATGGCTACCTCGTGGAGATCACAGGTGAAGCCTCACGCTCAGGCGATAACTACTGGGTCCGTTATGACCTCAAGGGCCGAGTGTGGCGTGAGACGGTTGAGCCGGGAATCATTGCTGGCTTCAATGCTCAGACGATGCCCCGTGGTCTGGTCCGTGCTGCTGATGGTCACTTTGACTGGAAGGTCCTTGACTGGGCTGACCGGAAGTCTGGCGATAACGAGACCAACCCGATGCCTTCCTTCGTGGACGGTACGATCAATGACGTGTTCTTCTTCCGTAACCGGCTGGGCTTCCTGTCCGGGGAGAACGTGATCATGACCCGATCAGCGCGATACTTCAGCTTCTTCCCACCAAGCGTGGCGAGCCTGTCTGACGATGACCCGCTGGATCTGGCTGTGTCTCACAACCGAATCTCGATCCTTAAGTACGCCGTACCGTTCTCGGAACAGTTGCTACTATGGTCTGATCAGGCCCAGTTCGTGTTGTCCTCTTCGGGCATCCTGTCGCCCAAGACGGTTGAGCTGAACCTGACCACAGAGTTCGACGTGCAGGACACCGCTCGGCCTTTCGGGATCGGACGTGGTGTGTACTTCAGCGCCCCTCGGGCTGCCTTCACGAGCCTCAAGCGTTACTACGCTGTGCAGGACGTATCGGACGTTAAGAACGCTGAGGACGTATCTGCACACGTTCCAAGCTACATCGAGAACCGGGTGTTCAACATTCATGGCTCAGGGACCGAGAACTATGTGACCCTGTTGTCTGACGGGGCACCGGGCCGGGTCTACGTGTATAAGTTCCTCTATCTAAACGAGGACATCGCGCAGCAGTCGTGGAGCCACTGGGAGTTCGGCGATGACGTTAGCATCCTTGCGGCTGCCTCGATTGGTTCCTACATGTACATCTTGATGGACCGCCATGAAGGGGTCGTACTGGAGCGCGTGGAGTTCACAGCGTTTACTCGGGACTTCCCTGAGGAACCTTACCGGACCTACATCGACGCCAAGGTGATGACGACCTGCACCGTTTACGATGAAGACTTGAACCTCTCGTCGTTGAACCTTCTGGACCTTTATGGGGCCCCACCGCACAACACGACCCGCTTCTGGTCCATCGACACGGACGGCGTGAGTGTTCTCCATGAGGCACCTAAAGGTGGCTGGGCGGCTGACTCTCGGTTGTACCTTCAGGGTGACCAGCGTGGCCGTCGCTTCGTGATCGGTCGGCAGTTCCTGTTCCTCTATGAGTTCTCGAAGTTCCTCATTAAGCAAACCGCTGATGATGGGTCGATCACCACTGAGGATAGCGGACGGTTGCAGCTTCGCCGTGCATGGTTGAACTACGAGTCCTCCGGGTCCTTTGAAGTCAACGTGAACAACGGCTATGCCCAGTACGTCTACACCATGGCCGGTGGCCGGATCGGTTCTGAGGTTCGCCTCGGTGAGCTGAGCCTTGGCACTGGGCAGTACAAGTTCCCCGTTACGGGCAACGCTCTAAAGCACCGTGTGGCCCTGATGTCTGACGCACCGAACCCACTCAACGTGATCGGCTGTGGCTTCGAGGGTAACTACGTGCGGCGTACCAACGGGATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d5a3a28527e5ea7173aeefbce80cb605a2a80f1e69add828f1cea7fee13c2c36
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9164
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of new Aeromonas and Pseudomonas phages promising in phage therapy dedicated to aquaculture Kolsut,J., Wojcik,E., Wojtasik,A. and Dastych,J. 2005-10-01 — GenBank