Protein

View in Explore
Genbank accession
QVJ13165.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,86
Protein sequence
MPAGTILLTQNSKNVVGQQTLFTSECQPGDIIAATVGGDTYMVTVESITSDTALTIIKPYLGTTTGGLGWYVLPESLLFEVPAQMSYDVHYQLRAAIYDKLNWQKVFSSPGNITVQLADGSEFSGPSWKKLVELLEEATGQDPDPGPTQAYGLYRERVTSAAATVVVRADLASHHVITLNSPSCALSISGASNLLDTAQELVLSLKQGTGANLVSWPGNVKWANGLKPPLSYIQGKIDLVQLLTFDRGTTWLGIHVNSGY
Physico‐chemical
properties
protein length:260 AA
molecular weight: 27874,26340 Da
isoelectric point:5,00742
aromaticity:0,08077
hydropathy:0,01962

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage PSA28
[NCBI] 		2833440 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QVJ13165.1 [NCBI]
Genbank nucleotide accession
MZ089737.1 [NCBI]
CDS location
range 4309 -> 5091
strand +
CDS
ATGCCAGCAGGTACTATCTTACTCACACAGAACTCCAAGAACGTGGTCGGTCAGCAGACCCTGTTCACCTCGGAGTGTCAGCCGGGCGACATCATCGCCGCCACTGTTGGTGGCGACACCTATATGGTGACGGTGGAGTCCATAACATCCGACACCGCCCTGACCATCATCAAGCCGTATCTCGGCACTACGACCGGAGGGCTGGGCTGGTATGTGCTCCCCGAGTCCCTGCTGTTCGAGGTCCCGGCCCAGATGTCGTATGATGTGCACTATCAGCTACGTGCAGCTATCTACGACAAGCTTAACTGGCAAAAGGTCTTCTCCTCGCCGGGCAACATCACGGTGCAGCTTGCCGATGGCTCGGAGTTCTCGGGCCCGTCATGGAAAAAGCTCGTCGAACTGCTGGAGGAGGCCACTGGCCAAGACCCGGACCCAGGCCCGACACAGGCGTATGGCCTCTACCGCGAGCGTGTGACGAGTGCCGCCGCCACGGTGGTGGTCAGGGCTGACCTCGCATCGCATCACGTCATCACCCTGAATAGCCCATCCTGCGCCCTCTCAATATCGGGGGCCTCAAACCTGCTGGACACGGCGCAAGAGCTTGTGTTATCATTGAAGCAGGGGACCGGGGCTAATCTGGTGAGCTGGCCGGGCAACGTTAAATGGGCCAACGGACTAAAGCCGCCTCTGTCCTATATCCAAGGTAAGATTGACCTTGTGCAGCTGCTGACGTTCGACCGTGGCACTACATGGCTTGGCATTCACGTGAACTCGGGGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
04c23611921ef8869bca408493def684918fb49ca80af25155e52eba1a123947
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8778
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Lytic bacteriophages targeting P. aeruginosa isolated from hospital wastewater Nordstrom,H.R., Evans,D.R., Finney,A.G., Westbrook,K.J., Yassin,M.H., Doi,Y. and Van Tyne,D. 2021-07-09 — GenBank