Protein

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Genbank accession
QBQ72529.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MAGYSRQSVADIIANAVIKAAPVNAEFNAIRDAFALSGGHKHDGSSTEGAYVPLIADTDALNKVVIDTANNRISFYNEVSAAAVEQIRLEDGVLKPVTDDDIDLGAVGAEFKDLYIDGIGYIDSVVITGGTIDGTVIGGTTPAAGDFTNVGLTGNLSVTGTSTLTGTATITSADINSGAVDNTVIGGTTPVAGSFTTLSATGTSTLTTVDVNGGNIDGTIIGASTPAAATFTDVTATGTTTVTTADINGGAIDGTVIGASSAAAGSFTTVSTSGQATLATVDINGGAIDGAIIGATTPAAITGTTVTATSFVGPVTGNITGNLTGNVTGNVTGDLTGNVTASSGSSTFNNVTINGTLNMDAGTTATITNLTSPTNTNDAATKGYVDTSVANLVDSAPGTLDTLNELAAALGDDPNFSTTITNSIATKLPLAGGTMTGAIAMGTNKITGLGDPTAAQDAATQNYVTTNFLDLSGGTMTGAIDMGSSKVTTTYAPTNGADLTNKTYVDAILGSSTDAATSAAAAATSATNAATSETNAANSATAAASSATDAAASYDSFDDRYLGAKATPPTTDNDGDALITGALFFDTTANLMKVYDGSSWVDAGSAVNGTAERQVYTATASQTVFSSTYDVGFVDVYLNGIKLVSGTDYTATNGTSITLAAGATAGDTVDIVAYGAFNIANTYTQAQADARYAQLSGATFTGGITGTSGTFTGDLTVDTNTLYVDSTNNRVGVGTSSPNANAKLTLSGSGMEVPTGYGVFNDSGGANATGINFTAAGTNILTFFTGNAERMRITSSGNVGIGETTANEKLSINGGNIRLETQPSTTRRIYALGGTQSYVLNSTGGAAIAFERDASNNDEIAFETHAQGAAHAERMRIGNYGQLGFNGANYGTSGQVLTSNGSSSAPSWQTVTFTTNVITGNTTATANNHYYLNGSAITLTLPASPSVGDEVRISEVAGNTDCVIGRNGSNIMSSGTDLTIDTGYTVIYLRYVDATIGWAFS
Physico‐chemical
properties
protein length:1001 AA
molecular weight: 100088,76240 Da
isoelectric point:4,05003
aromaticity:0,06194
hydropathy:0,02328

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBQ72529.1
1 1001
Domain Start End Length (AA) Confidence
N-terminal 1 137 137 0,6636
Central domain 138 463 327 0,5570
C-terminal 464 1001 537 0,5180
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-137
Central
138-463
C-terminal
464-1001

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-2
[NCBI] 		2559281 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72529.1 [NCBI]
Genbank nucleotide accession
MK613344.1 [NCBI]
CDS location
range 35662 -> 38667
strand -
CDS
ATGGCAGGTTATAGCAGACAGTCAGTAGCTGACATTATCGCTAATGCGGTTATTAAAGCTGCACCAGTAAACGCTGAGTTTAATGCAATACGTGATGCGTTTGCTTTATCAGGCGGTCACAAACACGATGGTAGCTCTACTGAAGGTGCTTACGTACCTTTGATTGCTGACACTGACGCACTAAACAAAGTTGTGATTGACACAGCTAATAATAGAATTAGTTTTTACAATGAAGTATCTGCTGCTGCAGTAGAACAGATTCGACTAGAAGATGGTGTACTTAAACCTGTAACTGATGATGACATTGATCTTGGTGCTGTTGGGGCTGAGTTCAAAGACTTATACATTGATGGCATTGGCTACATTGACTCTGTAGTTATTACAGGCGGTACTATTGACGGTACGGTTATCGGTGGCACTACTCCTGCTGCAGGTGACTTTACTAACGTAGGACTAACAGGTAATCTAAGTGTTACAGGTACATCTACCCTGACAGGTACAGCAACTATTACCTCTGCTGATATTAACTCAGGTGCAGTGGATAACACAGTCATTGGTGGTACAACACCTGTTGCTGGTTCATTCACTACATTGAGTGCTACAGGTACGTCAACACTTACAACAGTAGACGTGAACGGTGGTAACATTGATGGCACAATTATCGGTGCAAGTACCCCTGCTGCAGCAACATTTACAGACGTTACAGCTACAGGTACAACTACCGTAACAACTGCTGACATCAACGGAGGTGCTATTGATGGTACTGTTATTGGTGCTAGTAGTGCTGCTGCAGGTAGCTTTACTACTGTATCGACATCTGGACAGGCTACCTTGGCGACTGTTGATATTAATGGTGGGGCTATTGACGGTGCTATTATTGGTGCAACAACTCCAGCGGCTATCACAGGCACGACAGTTACAGCAACTTCTTTTGTCGGACCTGTCACAGGTAACATCACAGGAAACCTTACAGGAAATGTAACTGGTAATGTAACTGGTGATTTAACAGGTAACGTTACTGCTTCAAGCGGTTCATCTACATTTAACAATGTGACGATCAACGGTACGTTGAATATGGATGCAGGTACAACTGCTACCATTACTAACCTGACAAGTCCAACTAATACAAACGATGCTGCAACTAAGGGGTATGTAGATACCTCTGTAGCTAACCTTGTAGACTCAGCCCCAGGCACACTAGACACACTAAACGAACTAGCTGCTGCGCTGGGTGATGACCCTAACTTCAGTACAACTATTACAAATAGCATTGCAACCAAGCTACCACTAGCAGGTGGTACGATGACTGGTGCTATTGCTATGGGTACTAACAAGATCACAGGCTTGGGTGACCCTACTGCAGCACAGGATGCAGCTACACAGAACTATGTAACAACTAACTTCCTAGACTTATCTGGTGGCACTATGACAGGTGCTATTGATATGGGTAGCTCTAAGGTTACAACTACCTATGCTCCTACAAACGGTGCTGATCTCACAAATAAAACATATGTAGATGCTATCTTAGGATCAAGCACAGACGCTGCTACAAGTGCTGCTGCTGCAGCTACATCAGCCACCAATGCTGCAACAAGCGAAACTAATGCAGCTAACTCTGCTACTGCTGCAGCTTCTAGTGCTACAGATGCAGCCGCTTCGTATGATAGCTTTGATGATCGCTACTTAGGTGCTAAGGCTACACCACCTACGACAGACAACGATGGTGATGCTCTTATTACTGGTGCATTGTTCTTCGACACCACTGCAAACTTGATGAAGGTCTATGATGGTTCTTCTTGGGTAGATGCAGGTTCTGCTGTTAACGGTACTGCTGAACGTCAAGTATATACAGCTACAGCATCACAAACTGTGTTCAGTTCTACATATGATGTCGGTTTTGTGGACGTGTATTTAAACGGTATCAAGTTGGTATCAGGTACTGACTATACAGCTACAAACGGTACAAGCATTACACTAGCAGCAGGTGCTACAGCAGGTGACACTGTAGACATCGTAGCTTACGGTGCATTCAACATTGCTAACACTTACACACAAGCACAGGCAGATGCACGATATGCGCAGCTATCAGGTGCTACCTTCACTGGTGGTATAACAGGCACCTCTGGTACGTTTACTGGCGATCTGACTGTAGATACAAACACGTTGTACGTTGATAGCACAAACAATCGTGTCGGGGTTGGGACGAGTTCGCCTAATGCAAATGCAAAGCTTACATTATCTGGTTCTGGTATGGAAGTACCAACAGGGTATGGCGTTTTTAATGACAGTGGTGGTGCAAACGCAACTGGTATAAACTTTACTGCTGCTGGCACAAATATACTTACGTTTTTCACTGGCAACGCAGAACGTATGCGCATCACTAGTAGTGGTAATGTTGGGATTGGTGAAACAACTGCAAATGAAAAACTAAGCATTAATGGCGGTAACATCAGGCTTGAAACACAGCCAAGCACAACTAGACGTATTTATGCACTAGGTGGCACACAATCATATGTATTAAACAGTACAGGCGGTGCTGCTATTGCGTTTGAACGTGATGCATCAAACAATGATGAGATTGCTTTTGAGACACACGCACAAGGTGCAGCACACGCTGAACGTATGCGTATTGGTAATTATGGTCAGCTTGGATTTAACGGTGCTAACTATGGTACATCTGGTCAGGTTCTAACATCTAATGGTTCTAGTTCTGCACCTAGTTGGCAAACTGTTACATTTACAACAAACGTAATCACAGGTAACACAACAGCTACAGCTAACAATCATTACTACTTAAATGGTTCAGCTATTACACTAACACTTCCAGCATCACCAAGCGTAGGTGACGAAGTGCGTATCAGTGAAGTAGCAGGTAACACAGATTGTGTGATCGGACGTAATGGTTCAAACATTATGAGTTCAGGAACAGACTTAACTATTGACACAGGCTATACAGTAATCTACTTGCGTTATGTGGACGCAACAATCGGTTGGGCATTCTCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
be07ed677cf3690635e0ac21f7a8719a2ac0f2a08cc933231f627a426462f2f7
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2864
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank