Protein

View in Explore
Genbank accession
AUR87525.1 [GenBank]
Protein name
coil containing protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSIAVFSNFVNGIPTTIYDGKDVSMVMLVDPPANLPAFFLAGKGILDTTSQTIKVYDETGNNVIHDFDISGADLLPINEAISALDGRVSTNEGSISSLSSDVSGNTSDITTNTDNISSLTGRTSALESTTSQHNTDIIALQSATGGNASDISALTLRVGQNETDIVAVLITANAADTLSKQNKERLDNLPAPPSLEGYIKTGDDATLNSVSFGDNTKIDTQPDLGLVLQGDYIYAKSDSGYEHFFVESGNFNVKSKKIQKVNDGQAIDDAVNLRQLNAVESKADAAQSTADGADTLSKVNQTAISNLSTTVGNNISGISTNAKDIGDLSTKVGEVEDVANAADTLSKNNKDRLDNLPEGGGLKPINSTWDMLGYPILNVGTSEETTSGATVGQVNAVKTVAESADTLSKANKTRLDNLPPSPDLSGYVKNGDDVNFGTAEIQVAKIVKGDEHSKFSEISIDGNTNTEMSLVGDTHVYQKNKDTGDLTEIFQIDSSHRFNVKTKIKTPIITTPLTGTTNSNSDNAAFIDLSLAGEVKLGAKSKVAINVGGNEIVDFADTGFKLLRDADANNHTISKMGDLKFSTNYQIEGSSANNLKVRNVGGVYGDDSTDDTSVRFSGTDVKYKATHHQYYSNGSNSQIFGVSGAGANLFNHNVLNVKHLLGNSAGTMNVAGISVLKRDDESDNTDSIHFNSGNLTHFSDKHEWKTNDNARRLTIENHTADWHDCQLKNVTDAADDKDVPSFKQLKTIVSTKWFEIVTANLASDGNRPTGASSDGNINVWHATVSSTTNPPNELKIDNAVAVKEALSWTNPLRYKLVQGDKVQYWETNSNGWSTSTSVWHLSATKVSGDDLAIGEETKVYASFLEESDGGNSPQEMDSFKKYVQPTSSVTYYAHQGDSHLYIEYRGNGGTVSLDTMRSGSEQTEDITILHNTTPAECALRLFFNGSSVTHTVPPKSYIQGWANRDMGRWATVITKEASEVTEQLVVKSTDLNWDTHSDPRNNTKRMIAAAPNMCTIIGRHNASGSAKEKIVSVGSTNKVETQTSTFVINKYSSGHATGICTSEESSGKTWSRILDGTRGAWFTNESANSRMASVDINPEDYPENQLFFTTDQGIMETYIIDDTGEIGLRVLEGYNVPKNEQDIAALEVQTEKNRSVTHYFINEGDLSYDWPDETRRPLVEVGVLNTTQTINNSSVTVTDNDTHRYSGTYNTVGSIAINTSGDWTNQYTYHNCYKHVSESYYVVFNQGNASWQLIESANPHTSIGSHAASVTVQLGGQTSLPESFGNYTIDPNFDNIDSLEFLSAEVPIQYDDVNSRVLINFNGAKPSGYVVLK
Physico‐chemical
properties
protein length:1333 AA
molecular weight: 144111,22000 Da
isoelectric point:4,79610
aromaticity:0,07052
hydropathy:-0,47659

Domains

Domains [InterPro]
G3DSA:1.20.5.340
STR
73–133
G3DSA:1.20.5.340 DC_2074 DC_2074 DC_2074
IPR000595
RBD
230–307
IPR000595 DC_2074
AUR87525.1
1 1333
Architecture
STR
RBD
STR
STR
STR 73-274 | RBD 275-300 | STR 301-1137 | STR 1167-1332 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR87525.1
1 1333
Domain Start End Length (AA) Confidence
N-terminal 1 1061 1061 0,3752
Central domain 1062 1260 200 0,2095
C-terminal 1261 1333 72 0,6921
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-1061
Central
1062-1260
C-terminal
1261-1333

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.101.O._10N.261.45.C6
[NCBI] 		2070725 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Enterovibrio norvegicus
[NCBI] 		188144 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR87525.1 [NCBI]
Genbank nucleotide accession
MG592473 [NCBI]
CDS location
range 63272 -> 67273
strand +
CDS
ATGTCAATAGCAGTATTTAGTAATTTTGTTAATGGCATCCCTACCACTATTTATGATGGTAAGGATGTCTCTATGGTTATGCTGGTTGATCCGCCAGCAAACCTTCCTGCTTTCTTCTTGGCGGGTAAAGGTATTTTAGATACCACATCACAAACAATCAAAGTTTATGACGAAACAGGTAATAATGTAATCCATGACTTTGATATTTCAGGTGCAGATTTATTACCTATCAATGAAGCTATTTCAGCTTTAGATGGTAGGGTTAGTACGAATGAAGGAAGTATTTCATCCCTTTCTTCGGATGTCTCAGGTAACACAAGTGATATTACCACCAATACAGATAATATTTCAAGTCTTACAGGTAGAACATCTGCACTAGAATCTACTACAAGTCAGCACAATACAGATATTATAGCGTTGCAATCTGCAACAGGTGGCAATGCTTCTGATATATCAGCTCTTACTTTACGTGTTGGACAGAATGAAACTGATATCGTAGCAGTTCTTATTACAGCCAATGCAGCAGATACACTCTCTAAACAAAACAAAGAGCGATTGGACAACCTCCCTGCTCCTCCAAGTTTAGAAGGTTATATTAAAACTGGTGATGATGCAACATTAAATAGTGTCAGCTTTGGTGACAACACTAAAATTGACACTCAACCAGATTTAGGTTTGGTGTTACAAGGTGATTATATTTACGCTAAATCTGATAGCGGATATGAGCACTTCTTTGTTGAATCTGGAAACTTTAATGTAAAAAGTAAAAAGATCCAGAAGGTTAATGATGGACAAGCTATAGATGATGCTGTAAACCTTCGCCAGTTAAACGCTGTTGAATCTAAAGCAGATGCTGCACAATCTACTGCTGACGGTGCTGATACCCTGTCTAAGGTTAACCAGACCGCTATTTCAAACCTATCCACAACTGTCGGTAATAATATCTCTGGTATTTCTACAAATGCTAAAGATATCGGAGATTTAAGCACCAAGGTAGGTGAGGTGGAAGATGTCGCCAATGCAGCGGATACCTTATCTAAGAACAACAAAGATCGTTTAGATAATCTTCCCGAGGGTGGAGGTTTAAAACCTATAAATAGTACTTGGGATATGCTTGGGTATCCTATCTTAAATGTCGGGACATCTGAGGAAACAACAAGCGGTGCAACTGTTGGTCAAGTAAACGCTGTAAAAACTGTAGCAGAATCTGCTGATACACTATCCAAGGCTAACAAAACTCGTTTAGATAACTTACCTCCTTCACCAGATTTGAGTGGGTATGTCAAAAACGGTGATGATGTTAACTTTGGAACTGCTGAAATCCAAGTTGCTAAGATTGTTAAAGGTGATGAGCACTCCAAGTTTTCAGAAATCTCGATTGACGGAAACACCAACACTGAGATGAGTTTAGTCGGTGATACACATGTCTATCAGAAAAACAAAGATACAGGTGATCTAACTGAAATATTTCAGATTGACAGCTCTCACCGCTTCAATGTTAAGACGAAAATCAAAACGCCGATAATCACCACTCCTCTAACTGGTACAACCAATTCAAACTCAGATAACGCCGCATTTATTGACTTAAGTTTGGCTGGTGAAGTTAAACTTGGTGCCAAGAGTAAAGTCGCTATTAATGTTGGTGGGAATGAAATTGTTGATTTTGCTGATACCGGATTTAAGTTGCTTCGGGATGCTGATGCAAATAACCACACCATCTCTAAAATGGGTGATCTTAAGTTCAGCACAAACTATCAGATTGAGGGTTCGTCTGCCAATAATCTTAAAGTAAGAAATGTTGGTGGTGTATATGGTGATGATTCAACAGATGACACGTCAGTAAGGTTTAGCGGAACCGATGTTAAGTACAAAGCTACTCACCACCAATACTATTCAAATGGCTCTAACAGTCAAATATTCGGTGTTAGTGGGGCAGGTGCAAATTTATTCAATCACAATGTTTTAAATGTTAAGCATCTGCTTGGTAATTCAGCAGGGACAATGAATGTTGCCGGAATCAGCGTCCTGAAACGTGATGATGAAAGTGATAATACAGACTCTATTCATTTTAATTCAGGAAATTTAACACATTTCTCCGATAAACATGAGTGGAAAACTAACGATAACGCTCGTCGTCTGACTATTGAAAACCATACTGCAGATTGGCATGATTGTCAACTTAAAAATGTTACAGATGCTGCTGATGATAAAGATGTTCCTAGTTTTAAGCAACTTAAAACAATTGTTTCAACTAAATGGTTTGAGATTGTCACAGCAAATTTGGCATCCGATGGTAATAGACCTACAGGTGCATCTTCAGATGGTAATATTAACGTTTGGCATGCAACTGTTTCATCAACAACTAACCCTCCTAATGAGTTGAAGATTGACAACGCTGTTGCAGTTAAAGAAGCGTTATCTTGGACTAACCCTTTACGTTACAAGCTGGTACAAGGGGATAAGGTACAATACTGGGAAACTAACTCTAATGGTTGGAGTACAAGCACCTCTGTTTGGCACTTATCAGCTACAAAAGTTTCAGGTGATGACCTCGCTATTGGAGAGGAAACAAAAGTATACGCCTCTTTCTTAGAAGAGTCTGATGGTGGTAATAGTCCACAAGAGATGGATAGTTTTAAGAAGTATGTACAACCTACCTCCTCAGTAACTTACTATGCACACCAAGGTGATAGTCACTTATACATTGAGTATAGAGGGAATGGTGGTACGGTATCTCTAGATACAATGAGGTCTGGCAGTGAACAAACTGAAGATATAACAATCCTGCACAACACAACACCTGCTGAGTGTGCTCTTAGATTGTTCTTTAATGGTTCAAGTGTTACCCATACTGTCCCACCTAAATCTTATATTCAAGGTTGGGCTAACAGGGATATGGGACGTTGGGCTACTGTTATAACTAAAGAAGCTAGTGAGGTCACAGAGCAACTTGTTGTAAAATCTACAGATCTGAACTGGGATACTCACTCAGATCCTAGAAACAATACCAAACGTATGATTGCTGCTGCACCCAACATGTGTACTATTATTGGTAGGCATAATGCAAGTGGTTCGGCTAAAGAGAAGATTGTAAGTGTAGGTTCTACAAATAAAGTTGAAACTCAAACTTCTACATTTGTTATAAATAAATATTCTTCTGGTCATGCTACAGGTATTTGTACTTCTGAGGAGTCTAGTGGTAAAACTTGGTCTCGTATTCTTGATGGTACACGAGGGGCATGGTTTACTAACGAGTCTGCGAATAGTCGCATGGCTAGTGTTGATATTAACCCAGAAGATTACCCTGAAAACCAATTATTCTTTACCACTGACCAAGGTATCATGGAAACATACATCATCGATGATACTGGTGAGATTGGTTTAAGAGTGTTGGAAGGGTATAACGTACCTAAAAACGAGCAAGATATTGCGGCACTAGAAGTTCAAACTGAGAAGAATCGTTCTGTCACTCATTACTTCATTAACGAAGGTGATTTGAGTTACGACTGGCCTGATGAAACACGAAGACCTCTTGTTGAAGTTGGTGTGTTGAATACTACCCAGACAATTAACAATTCTTCGGTAACGGTTACTGATAATGATACTCATAGGTACAGTGGTACATACAACACTGTAGGTAGTATTGCCATCAACACTTCAGGTGATTGGACGAACCAATATACTTATCACAACTGTTATAAACATGTTAGTGAAAGTTATTATGTTGTGTTCAATCAAGGTAATGCCTCATGGCAGTTAATTGAATCAGCTAATCCTCATACTTCAATAGGAAGTCATGCAGCGTCAGTTACGGTGCAACTTGGTGGTCAAACTTCTCTACCTGAAAGTTTTGGTAATTATACAATTGACCCTAACTTTGACAACATAGACAGTTTGGAGTTCCTCAGTGCCGAGGTACCTATTCAATATGATGATGTCAATAGTCGTGTGTTAATCAACTTCAACGGTGCAAAACCTTCTGGTTACGTCGTATTGAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f3c43fc3d56b74def4f965f5c6171ea21d18f950d4f7e09d180a8b347aaece64
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4391
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank