Protein

View in Explore
Genbank accession
NP_958678.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
Protein sequence
MSVQSTDRVAGPYPCNGLTTQFPFDFKVFNTGEVVAILSDADGVESTLTLGTDYTVALNDNQDSNPGGTLTTLATYATGYKITLTSEVPNTQPETLTNQGGFYPKVIEHALDRLVIQIQQLADKLSRTVQAPISGGLSSSEILEQLAEQLPLVSAVYGHLANIDAVATNEADIDTVAASVGAVDTVAGDLGGTWAAGVSYDFGSIAVPPIGNTSPPGGNIVIVANSIGNVDTVAENIGDVSTVSTHLSSMLAVANDIDSVVSVAGDLENIDAVADNAANINTVAGANANVNTVASNILDVGTVAGNIDDVQAVAGNAANINVVADNADNINATAANQANINAAVGNADNINAAVANQANINAVVGNANNINAVAANEGNVNTVVDNLADVQTVAGIAADVSTVAENEAAVAALGNDLTGQPMVIDYGDLSPASNPAAPAGVLGAVWANAENIAAVAENIAVIIEAANNLPAILAALSGALVPANNLSDLADPAAARANIGLADLGGIA
Physico‐chemical
properties
protein length:508 AA
molecular weight: 50683,21390 Da
isoelectric point:4,05003
aromaticity:0,03150
hydropathy:0,26890

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Bordetella phage BPP-1
[NCBI] 		2885909 Uroviricota > Caudoviricetes > Rauchvirus >
Host Bordetella bronchiseptica
[NCBI] 		518 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Betaproteobacteria > Burkholderiales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
NP_958678.1 [NCBI]
Genbank nucleotide accession
NC_005357 [NCBI]
CDS location
range 4599 -> 6125
strand -
CDS
ATGTCCGTCCAAAGCACAGATCGGGTCGCGGGGCCGTATCCCTGCAATGGCCTGACCACACAATTCCCGTTCGACTTCAAGGTGTTCAACACCGGCGAAGTCGTCGCCATTTTGAGCGACGCAGACGGTGTGGAATCCACCTTGACCCTGGGTACGGACTACACCGTTGCGCTGAATGACAACCAGGACTCCAATCCCGGCGGCACACTCACCACGCTGGCGACCTATGCCACTGGTTACAAGATCACGCTGACCAGCGAAGTCCCTAATACCCAGCCCGAAACCCTGACCAACCAGGGCGGCTTCTACCCCAAGGTCATCGAGCACGCGCTTGACCGGCTGGTTATCCAAATCCAGCAACTCGCCGACAAACTTAGCCGAACCGTGCAGGCCCCCATTTCTGGCGGTCTGTCATCGAGCGAGATTTTGGAGCAGCTTGCTGAACAGCTACCGCTGGTTTCCGCCGTGTACGGCCACCTCGCCAACATCGACGCCGTGGCTACCAACGAGGCGGACATCGACACGGTGGCGGCCAGCGTTGGCGCCGTCGATACCGTGGCGGGCGACCTGGGCGGAACCTGGGCGGCCGGCGTGTCCTACGACTTTGGCAGCATCGCCGTACCCCCCATCGGCAACACCTCGCCGCCCGGCGGGAACATCGTCATTGTCGCAAACAGTATCGGCAACGTGGACACGGTTGCTGAAAACATCGGCGACGTGAGCACCGTCAGCACGCACCTGTCGAGCATGTTGGCTGTCGCCAACGACATCGACAGCGTGGTATCCGTGGCCGGCGACCTGGAAAATATCGACGCCGTGGCCGACAACGCCGCGAACATCAACACGGTGGCCGGTGCCAACGCCAACGTCAACACCGTGGCGTCCAACATCCTCGACGTGGGCACGGTAGCCGGCAATATCGACGACGTGCAGGCGGTGGCAGGCAATGCGGCAAACATCAACGTCGTAGCCGACAACGCAGACAACATCAATGCGACCGCTGCTAACCAAGCGAACATCAATGCAGCGGTCGGCAATGCCGACAACATCAATGCAGCGGTCGCCAACCAGGCGAATATCAACGCAGTAGTCGGTAATGCCAACAATATCAATGCGGTAGCGGCGAACGAAGGAAACGTCAACACGGTTGTCGATAACCTCGCAGACGTGCAGACCGTCGCGGGCATCGCTGCCGACGTTTCCACCGTGGCCGAAAACGAGGCCGCCGTCGCCGCGCTGGGCAACGACCTGACCGGGCAACCTATGGTCATCGACTACGGCGACCTGTCGCCGGCCAGCAATCCCGCAGCGCCAGCCGGCGTGCTGGGCGCAGTGTGGGCGAACGCCGAGAACATCGCGGCCGTGGCCGAGAACATCGCGGTCATCATCGAAGCAGCCAACAACTTGCCGGCCATTCTCGCCGCGCTATCCGGCGCGCTGGTGCCCGCCAACAACCTGTCCGATCTTGCCGACCCTGCGGCAGCGCGGGCCAACATTGGCCTGGCTGACCTGGGCGGCATCGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e09c1568dbf8718c2f603f5619cd8b3e137d0c4d284b37264d1755782f54ee2f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7314
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Generalized transduction in Bordetella bronchiseptica and Bordetella pertussis Liu,M., Martinez de Tejada,G., Bruhn,K.W., Cotter,P.A. and Miller,J.F. 1967-05 — GenBank