Protein

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Genbank accession
YP_009790198.1 [GenBank]
Protein name
straight fibre tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MISNNAPAKMVLNSIMTGYTMAYVQHSIYTDYDVIGRSFWLKTEESIDRRDYTGIDTFFVMINNLIPSTSYEIQGAFYDSIIDSELLEAKIGINLSNETNFRTKEKPIITAARSESEPVDVGVGAPIVVVETTGEASYCIIELKSTASEDSEWVKYYIGALGPTIKFGGVPVGDYKIRISGQVTMPDGVTVDSSGYYEYPSIFTVAYNFVPPTAPTNIAFKAARIADGKERYDIRIEWDWERGAGANVREFLVTYINSEEYAKTGWAKAQKINVGAARAATIISFPWKVEHTFKVSSIAWGPNKQDITESAPVTFILNEDTPLDNSFVNETGIDVNYAFIKGSMKDGEIWRQTFLIDAATGAINIGLLDEEGKAPISFDPINRVVNVDGKVITRDINAANFIMTNLSGKDNPAIYTQGKSWGDNNSGIWMGMDNTSAKAKLDIGNATQWIRYDGDVLRISSGVVIGTPNGDVDLGTGMQGKQTVFVYKLATSLPAKPLEQDYPPPGWSKTPPNRTDMTQNIYATTGTLDPVTNKLLEGTSWSDVVQWSGTEGTIGHDGQRGPGMYSLGIPGLGGWDDGQANSFFQNNFGSPPVKYDVLTEFNSNAPQSAFTRQWNGSSWVNPAMVLHGNMIVNGTVTADKIVAGNAFLSQIGVNIIYDRNAALSGNPEAYYKMKIDLNSGYIHIR
Physico‐chemical
properties
protein length:685 AA
molecular weight: 75015,29850 Da
isoelectric point:4,81917
aromaticity:0,10511
hydropathy:-0,24657

Domains

Domains [InterPro]
IPR057550
STR
10–97
IPR057550 IPR057551 IPR057552 IPR057549
IPR057551
STR
103–197
IPR057551
YP_009790198.1
1 685
Architecture
STR
STR
STR
STR
STR 10-97 | STR 103-197 | STR 211-335 | STR 350-664 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009790198.1
1 685
Domain Start End Length (AA) Confidence
N-terminal 1 407 407 0,8539
Central domain 408 640 234 0,2387
C-terminal 641 685 44 0,7472
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-407
Central
408-640
C-terminal
641-685

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiLLS
[NCBI] 		1965465 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus LLS
Host Escherichia coli O157
[NCBI] 		1045010 Bacteria > Proteobacteria > Gammaproteobacteria > Enterobacteriales > Enterobacteriaceae > Escherichia

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009790198.1 [NCBI]
Genbank nucleotide accession
NC_047822 [NCBI]
CDS location
range 104777 -> 106834
strand +
CDS
ATGATTTCGAATAATGCACCAGCCAAAATGGTCTTAAATAGTATAATGACTGGATATACAATGGCATATGTCCAGCACTCTATATATACTGACTATGACGTTATTGGTAGATCTTTTTGGTTAAAGACAGAAGAAAGTATAGATAGACGTGATTACACTGGTATAGATACTTTCTTCGTAATGATTAATAATCTAATCCCCTCTACCTCCTATGAGATTCAGGGGGCTTTCTATGACTCAATTATTGACTCAGAGTTACTGGAAGCTAAGATTGGTATCAATCTCTCTAATGAAACTAACTTTAGAACAAAGGAAAAGCCAATAATTACTGCAGCAAGATCTGAATCAGAACCCGTTGACGTTGGTGTTGGTGCTCCAATAGTTGTTGTAGAGACTACTGGTGAAGCTAGTTACTGCATTATTGAATTAAAAAGTACTGCATCAGAAGATAGTGAATGGGTTAAGTATTATATAGGCGCGTTGGGACCTACTATCAAATTTGGTGGTGTTCCGGTTGGCGACTATAAGATCAGAATATCGGGTCAAGTTACGATGCCAGATGGTGTTACAGTTGACTCATCTGGTTATTATGAATATCCTAGCATTTTCACTGTAGCCTATAATTTTGTACCACCTACTGCACCTACTAACATTGCCTTTAAAGCTGCACGAATTGCAGATGGTAAGGAACGATATGATATCAGAATAGAGTGGGACTGGGAACGTGGTGCGGGTGCTAATGTCCGTGAATTTCTGGTTACTTATATAAACTCTGAAGAATACGCTAAGACTGGCTGGGCTAAAGCTCAAAAGATAAACGTTGGGGCTGCTAGAGCTGCAACGATTATATCATTCCCGTGGAAAGTTGAGCATACTTTTAAGGTATCATCAATTGCCTGGGGACCAAATAAGCAAGATATAACAGAGTCAGCTCCTGTAACATTTATATTGAATGAAGATACTCCTCTAGACAACAGCTTTGTCAATGAGACGGGTATTGATGTTAATTATGCCTTTATTAAGGGTAGCATGAAAGATGGGGAAATTTGGAGACAGACATTCTTAATCGACGCAGCTACTGGTGCAATTAACATTGGTCTACTAGATGAAGAAGGAAAAGCACCTATTTCTTTTGACCCTATAAACCGTGTTGTTAACGTTGATGGTAAAGTAATTACTAGAGATATTAATGCTGCGAATTTTATCATGACTAACTTATCTGGTAAGGATAACCCAGCAATTTACACTCAAGGTAAATCTTGGGGGGATAATAACTCTGGTATTTGGATGGGCATGGATAATACCTCTGCCAAAGCTAAGTTAGACATTGGTAATGCTACACAGTGGATTCGTTATGATGGTGATGTGCTACGTATTTCTAGTGGAGTAGTTATTGGAACTCCTAATGGTGATGTAGATCTGGGTACTGGTATGCAAGGTAAGCAAACAGTATTTGTTTATAAGTTAGCAACATCTCTACCTGCTAAACCACTAGAACAAGATTATCCGCCTCCTGGTTGGTCAAAAACTCCACCTAACCGTACAGATATGACACAAAATATCTATGCTACTACAGGTACACTTGATCCAGTTACTAACAAACTTCTTGAAGGTACTAGCTGGTCTGATGTAGTTCAGTGGAGTGGTACTGAAGGTACTATAGGGCATGACGGACAACGTGGTCCTGGGATGTACTCCTTAGGTATACCTGGTCTTGGGGGCTGGGATGATGGACAAGCTAATTCCTTCTTCCAGAATAACTTTGGTAGTCCCCCTGTTAAATATGATGTATTAACTGAATTTAATAGTAATGCCCCACAATCAGCATTTACACGGCAATGGAATGGTTCTAGTTGGGTTAACCCTGCAATGGTTCTCCACGGAAACATGATTGTTAACGGAACGGTGACGGCAGATAAAATTGTAGCAGGAAATGCTTTCTTATCCCAGATCGGTGTTAACATCATTTATGATAGGAACGCTGCATTATCCGGAAACCCTGAGGCGTACTACAAGATGAAGATAGACCTAAATAGTGGGTATATCCATATAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
16b4ce8798da929da12a8ba8740520a4b56b3d96e47a307c4b3495fdacd151f6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7976
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of new bacteriophage phiLLS Rubi-Rangel,L., Amarillas,L., Carrillo,H. and Leon-Felix,J. 2013-05-17 — GenBank