Protein

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Genbank accession
QDH45621.1 [GenBank]
Protein name
baseplate assembly protein
RBP type
TSP
Evidence DepoScope
Probability 0,99
Protein sequence
MTSNTKRASGSQVQRTAFAESMKTVYTSIPGHVLAFDPKTQRAQIQIGIQRVDINGVAWVPAPIVDVPVQFPGDDFVLEYEINPGCEGLVHFSQRCIDAWKQTGGTADNPAARFHNQQDAMFVPGIRSLPNVIKGFSNNGIKLRNEDASQYAWLKNDGSLAFGNSSGAINIGPDGSVNLTNGSGNVQLTADGRFIINGIEFGTHRHTGVESGGSTSGGPV
Physico‐chemical
properties
protein length:220 AA
molecular weight: 23428,80140 Da
isoelectric point:6,18484
aromaticity:0,07727
hydropathy:-0,29955

Domains

Domains [InterPro]
IPR037026
ATT
25–124
IPR037026 IPR044033
IPR037026
ATT
26–124
IPR037026
IPR041599
ATT
29–125
IPR041599
DC_1459
STR
100–220
DC_1459
QDH45621.1
1 220
Architecture
ATT
STR
ATT 25-125 | STR 126-220
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QDH45621.1
1 220
Domain Start End Length (AA) Confidence
N-terminal 1 128 128 0,7926
Central domain 129 209 82 0,0407
C-terminal 210 220 10 0,9924
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-128
Central
129-209
C-terminal
210-220

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage vB_PagM_AAM22
[NCBI] 		2588092 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH45621.1 [NCBI]
Genbank nucleotide accession
MK798142 [NCBI]
CDS location
range 24922 -> 25584
strand +
CDS
ATGACCAGCAACACTAAACGAGCGTCAGGCTCACAGGTGCAACGTACTGCATTTGCTGAGAGTATGAAAACTGTTTACACCTCCATTCCGGGACACGTGCTGGCGTTCGACCCGAAGACACAGCGTGCTCAGATTCAGATTGGTATCCAGCGTGTGGACATCAATGGTGTTGCATGGGTGCCTGCTCCCATTGTAGATGTACCTGTTCAGTTTCCGGGTGATGACTTTGTACTGGAGTATGAAATCAACCCCGGCTGTGAAGGACTTGTTCATTTCAGTCAGCGGTGTATTGATGCGTGGAAGCAAACAGGTGGCACAGCTGATAATCCTGCTGCACGCTTCCATAATCAACAGGACGCAATGTTTGTTCCGGGCATCAGGTCGCTACCTAATGTTATTAAAGGCTTCAGCAATAACGGTATTAAGCTACGTAATGAAGATGCCTCACAATATGCGTGGCTTAAGAATGACGGCTCGCTGGCTTTTGGGAATAGTTCTGGTGCCATAAACATCGGTCCAGATGGTTCAGTCAATCTCACTAATGGCTCTGGCAACGTACAACTCACTGCTGACGGTAGGTTTATTATAAATGGTATCGAATTTGGTACGCACCGCCACACTGGTGTTGAATCAGGCGGAAGCACTTCAGGGGGTCCGGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
dfd15b9f1aba5d325a92276c4900d9cda6392744a5a7c4a381d9dba9ecefc980
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8905
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage vB_PagM_AAM22 Truncaite,L., Simoliuniene,M., Zajanckauskaite,A., Meskys,R. and Simoliunas,E. 2011-08-10 — GenBank