Protein

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Genbank accession
YP_010099968.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MILTEQETMVLRERIKTILSVGVHCVVFEKANGDVRTMFASRDELEVKYENNNPATEVRYEPRESVRAFDTKLGQWRSFRLDKVISVDGTPVERLLLM
Physico‐chemical
properties
protein length:98 AA
molecular weight: 11403,00830 Da
isoelectric point:5,85609
aromaticity:0,07143
hydropathy:-0,33061

Domains

Domains [InterPro]
IPR024401
STR
13–84
IPR024401
YP_010099968.1
1 98
Architecture
STR
STR 13-84 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage p000v
[NCBI] 		2479933 Uroviricota > Caudoviricetes > Pantevenvirales > Tevenvirinae > Mosigvirus
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010099968.1 [NCBI]
Genbank nucleotide accession
NC_055781.1 [NCBI]
CDS location
range 17403 -> 17699
strand +
CDS
ATGATTTTAACTGAACAAGAAACTATGGTTCTTCGTGAACGTATTAAAACTATTCTGTCTGTAGGCGTTCATTGTGTTGTATTTGAAAAGGCTAACGGTGATGTACGCACTATGTTTGCTTCGCGCGATGAACTTGAAGTCAAATATGAAAATAACAATCCAGCAACAGAAGTTCGTTATGAACCTCGTGAATCAGTTCGAGCATTCGATACCAAGTTAGGTCAGTGGCGTTCTTTCCGCCTTGATAAAGTAATTTCGGTTGATGGTACTCCGGTCGAACGTTTGCTTCTTATGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
354288ed9065180f9297d3a8463c0f3b2e290e056c9448a538be78581564814c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole-genome sequence of phages p000v and p000y infecting the bacterial pathogen Shigatoxigenic Escherichia coli Howard-Varona,C., Vik,D.R., Solonenko,N.E., Li,Y.-F., Gazitua,M.C., Hobbs,Z., Honaker,R.W., Kinkhabwala,A.A. and Sullivan,M.B. 2018-11-21 — GenBank