Protein

View in Explore
Genbank accession
QIG75274.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,75
Protein sequence
MKLVFWFFVALLTLTETALADPVTAAIGAFASTAIGGFIVKAVIGLALSIGTSLLKGMLTKKKPGQKDPGTSIQLQVGGDNSLFFPLGRAATGGVRVYCGTWTGDGLSFGKTPNEYAVDVIALSAMPLSSTNIILWMNDQKVTVLTSESKTEMGWPINEYRYKGKDYAWVDFFDGTQTTSSSYLLSRFGSHPDYPWTSDMIGRGVAYAIFTARYQSNGLWSGGFPSLTFELPSIKLYDIRKDSTAGGSGTHRWNNPATWQASNNNMVRAYNVMRGIYYGDEWVYGGQDWPAFRLPAASWMAGMNACDLVVGGVNQFYGGGMVECDVEPAKSVEELLRGASGLIAEIGGVYKIRIGAPGAAVFAFTDDNIIVTREQGYSPFPGLEDTYNIVRLSYTEPAEKWASKEAPERRDAAMIAADDNRELPMSVELPWTLNNPTAQRIGLAALLNGRRFRRHQHYLPPEAWLLEPLDVVSWSSAHNGYVNKAFDIEQISGESTLMQGVTIRENDPSDYDWNPETDELPYTTVPLIPSFPAPQQMTGWQVQPAILKDNDGDDRRPSIQVFFDAELTDVARVRVQVRLDGETNAMFDGEVPYDPLVLAPSVILQGQFLPNTDYQARGIFVPFTDRQTEWSDWLDVTTPNVLLSDKDVYLPGVLDGVNEIVSDATKWVRDGVRQTILEQQRIARLTMDQDFGDYTDRQKLRTELVSVQQGVTASYSNAIVVATGPNSALSLRIEELTTYVNDVVATAIQTLSAEIDSQGLALSQAITALSAANTSGDVATANFRMTAQAGPDGVSARIGMEARAGGVGAFRSAGLFIDVPEDVADPSRVVILADQFVVADPDDSATQNFPLIFQDGELTLNVANIGTVNAGFITNPGGKMNIDIDNGTIEIYD
Physico‐chemical
properties
protein length:893 AA
molecular weight: 97384,29410 Da
isoelectric point:4,53708
aromaticity:0,09742
hydropathy:-0,13695

Domains

Domains [InterPro]
DC_0187
STR
6–878
DC_0187
IPR032876
ATT
329–480
IPR032876
QIG75274.1
1 893
Architecture
STR
ATT
STR
STR 6-328 | ATT 329-480 | STR 481-878 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_Y21
[NCBI] 		2509774 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG75274.1 [NCBI]
Genbank nucleotide accession
MN988544.1 [NCBI]
CDS location
range 24945 -> 27626
strand -
CDS
ATGAAACTCGTTTTTTGGTTCTTCGTCGCGCTTCTGACGTTGACAGAGACGGCGCTAGCCGACCCCGTCACGGCTGCGATCGGCGCGTTTGCTTCGACTGCGATCGGCGGGTTCATTGTCAAAGCGGTGATCGGCCTTGCGCTGTCGATCGGCACAAGCCTTTTGAAAGGCATGCTGACGAAGAAGAAGCCGGGTCAGAAAGACCCCGGAACAAGCATTCAGCTTCAGGTCGGCGGCGACAATTCGCTATTCTTCCCGCTCGGCAGGGCCGCGACCGGCGGCGTCCGTGTCTATTGCGGCACGTGGACGGGTGATGGTCTGTCATTCGGCAAAACCCCGAATGAATACGCCGTCGACGTTATCGCCCTGTCTGCCATGCCTCTTTCGTCGACGAACATTATCCTATGGATGAACGACCAGAAAGTGACGGTTCTGACCAGCGAGTCAAAAACCGAAATGGGATGGCCGATCAACGAATACCGCTACAAGGGTAAAGATTACGCGTGGGTCGACTTCTTCGACGGCACGCAAACGACGTCTAGTTCATACCTGCTTTCCCGGTTCGGTTCGCATCCGGATTACCCGTGGACGTCGGACATGATCGGTCGCGGCGTCGCGTATGCGATCTTCACGGCTCGGTATCAAAGCAACGGCCTGTGGTCGGGCGGTTTCCCTAGCCTGACATTCGAACTGCCGTCGATCAAGCTTTATGACATCCGCAAGGATTCGACCGCCGGCGGCTCGGGAACACACCGCTGGAACAACCCGGCGACATGGCAGGCATCAAACAACAATATGGTGCGCGCCTATAACGTGATGCGAGGCATCTATTACGGCGACGAATGGGTTTACGGCGGTCAGGATTGGCCGGCCTTCCGCCTGCCGGCCGCGTCATGGATGGCAGGCATGAACGCCTGTGATTTGGTCGTCGGCGGCGTCAATCAGTTCTACGGCGGCGGCATGGTTGAATGCGACGTCGAACCCGCGAAATCGGTCGAAGAACTCTTGCGCGGTGCATCCGGCCTGATCGCTGAAATCGGCGGGGTTTACAAAATCCGCATCGGCGCGCCCGGCGCGGCTGTCTTCGCGTTCACCGATGACAACATCATTGTCACGCGCGAACAGGGTTATTCGCCGTTCCCCGGCCTTGAAGACACGTACAATATCGTGCGTCTTTCCTACACGGAGCCGGCGGAAAAATGGGCAAGCAAGGAAGCTCCGGAACGCCGTGACGCCGCCATGATCGCGGCCGACGACAATCGTGAATTGCCCATGTCGGTCGAACTGCCGTGGACGCTGAACAACCCGACCGCGCAACGTATTGGCCTTGCCGCGCTCCTGAACGGTCGGCGCTTCCGTCGCCATCAGCACTATTTGCCGCCGGAAGCGTGGTTGCTTGAACCGCTCGACGTCGTGTCGTGGTCATCTGCCCATAACGGGTATGTGAACAAGGCATTCGACATCGAACAGATCAGCGGCGAATCGACCTTGATGCAGGGCGTTACGATCCGCGAAAACGACCCGTCCGATTACGATTGGAACCCGGAAACGGACGAACTGCCGTATACGACCGTCCCGCTTATCCCTAGCTTCCCGGCTCCGCAACAAATGACCGGCTGGCAGGTTCAACCGGCGATCCTGAAGGACAACGACGGTGACGACCGCCGGCCGTCGATCCAAGTATTCTTCGACGCGGAACTGACCGACGTCGCGCGCGTGCGCGTTCAGGTCCGACTTGACGGCGAAACGAACGCGATGTTCGACGGCGAAGTTCCATACGATCCGCTTGTTCTCGCACCGTCCGTGATCCTTCAGGGTCAGTTCCTACCGAACACCGATTATCAGGCGCGCGGGATATTCGTTCCGTTCACCGATCGTCAAACCGAGTGGTCGGATTGGCTGGACGTGACGACCCCGAATGTGTTGCTTTCCGACAAAGACGTTTATCTGCCGGGCGTGCTGGACGGCGTGAACGAAATTGTCAGCGACGCGACCAAGTGGGTCCGCGACGGTGTGCGTCAGACGATCCTTGAACAGCAACGCATTGCGCGCCTGACCATGGATCAAGATTTCGGCGATTACACCGATCGTCAGAAGCTCCGCACGGAACTTGTCAGCGTTCAGCAAGGCGTGACCGCAAGCTACAGTAACGCGATCGTCGTCGCGACCGGACCGAACTCCGCGCTTTCGCTCCGCATCGAAGAACTGACGACCTATGTCAACGATGTCGTCGCAACCGCAATTCAAACCCTGTCGGCGGAAATCGATTCGCAAGGTCTCGCATTATCACAGGCGATCACCGCCCTGTCGGCCGCGAACACGTCCGGAGACGTGGCGACGGCGAATTTCCGCATGACCGCGCAAGCTGGACCTGACGGGGTCTCGGCGAGGATCGGCATGGAAGCGCGCGCCGGCGGCGTTGGTGCGTTCAGGTCCGCCGGCCTGTTTATCGACGTACCGGAAGACGTCGCCGACCCGTCCCGCGTGGTTATCCTCGCTGATCAGTTCGTTGTTGCCGATCCGGACGATTCCGCGACGCAAAATTTCCCGTTGATTTTCCAAGACGGCGAACTTACGCTTAACGTCGCGAACATCGGCACTGTAAACGCCGGGTTCATCACCAATCCGGGTGGTAAGATGAACATCGATATTGATAACGGAACAATCGAGATTTACGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8937253b179ed9a0dae1622e3061d3dd2ce19e08c29732301faee7729e2bbb2a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,3168
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank