Protein

View in Explore
Genbank accession
XYL45844.1 [GenBank]
Protein name
virion structural protein
RBP type
TF
Evidence RBPdetect
Probability 0,87
Protein sequence
MDGRFLDATRELEGGKLVVGEDGAPESVAPAVGETAQVVRVLYAEERGQLTFVCSDSSTVTVSGFPTLAQLGAGPRGKKGKAGKPGRDGFPGRDGPTGQPGCEGQKGGTGPTGDRGNDGEDGPTGQTGMMGRRGITGPTGIQGPTGKTGHDGVVGNPGPNCMAGPTGPTGPTPAPYAVFDTKLPANTGVFVWAIPATPGKPRPEVPRWTPVLINIPYRAVSARRQFSTKYFAANTDIVAKVSGGSGVYEYEWVLPKVDGVTFSQNGTRLSVAYVYRVPDSKYKGERFKIKLNVRDSGRPGRPVFQGTAEVFIEVVQ
Physico‐chemical
properties
protein length:316 AA
molecular weight: 32993,71900 Da
isoelectric point:9,27972
aromaticity:0,07595
hydropathy:-0,44873

Domains

Domains [InterPro]
DC_0341
STR
3–308
DC_0341
IPR050149
Unmapped
74–179
IPR050149
IPR008160
STR
116–171
IPR008160
XYL45844.1
1 316
Architecture
STR
STR 3-308 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage vB_AerVM_332-Igor
[NCBI] 		3414681 Viruses >
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XYL45844.1 [NCBI]
Genbank nucleotide accession
PQ474294 [NCBI]
CDS location
range 99004 -> 99954
strand -
CDS
ATGGATGGCCGTTTTCTTGATGCTACTCGCGAACTAGAAGGCGGTAAACTTGTTGTTGGTGAAGACGGGGCACCCGAATCGGTTGCTCCGGCAGTCGGAGAGACAGCTCAAGTTGTCCGTGTTCTTTATGCAGAGGAACGCGGACAATTGACGTTTGTATGCTCTGACTCTAGCACAGTTACCGTCAGTGGTTTCCCTACACTCGCACAACTCGGTGCAGGGCCGCGCGGAAAGAAAGGTAAAGCAGGTAAACCTGGGCGTGATGGATTCCCCGGACGTGATGGCCCCACAGGCCAACCCGGATGTGAGGGCCAGAAAGGTGGAACGGGGCCGACAGGTGATCGCGGCAACGATGGTGAAGATGGCCCGACTGGTCAAACAGGGATGATGGGGCGTCGTGGTATCACGGGGCCGACAGGCATTCAAGGGCCGACAGGTAAAACTGGTCATGATGGCGTAGTCGGAAATCCCGGGCCGAATTGTATGGCTGGCCCCACTGGCCCCACCGGCCCAACACCCGCGCCCTATGCAGTGTTCGATACGAAGTTGCCAGCTAACACTGGCGTGTTCGTGTGGGCAATTCCTGCAACTCCCGGGAAACCGCGACCGGAAGTTCCGCGATGGACTCCCGTGCTTATCAACATTCCTTACCGAGCAGTCAGTGCCCGACGTCAGTTCTCTACGAAGTATTTCGCAGCGAACACCGACATTGTGGCGAAGGTTAGCGGCGGGAGTGGTGTGTACGAATACGAGTGGGTTCTTCCGAAGGTCGATGGCGTCACGTTCTCGCAGAACGGCACGCGCTTGAGTGTTGCTTACGTGTACCGTGTACCGGACAGCAAATACAAAGGCGAGCGCTTCAAGATTAAGTTGAACGTGCGAGATAGCGGACGCCCAGGGAGACCAGTGTTCCAAGGCACAGCAGAAGTATTCATAGAGGTGGTTCAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f50cb5511d91fb48505c584cc8e2287a08655f04fc56f9e9856076738f3c6676
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5898
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel Giant Phages vB_AerVM_332-Vera and vB_AerVM_332-Igor and Siphophage vB_AerVS_332-Yulya Infecting the Same Aeromonas veronii Strain Babkin,I.V., Morozova,V.V., Kozlova,Y.N., Fedorets,V.A., Tikunov,A.Y., Ushakova,T.A., Bardasheva,A.V., Zhirakovskaya,E.V. and Tikunova,N.V. 2025 — GenBank