Protein

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Genbank accession
UJH95984.1 [GenBank]
Protein name
putative tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,81
TSP
Evidence RBPdetect2
Probability 0,91
Protein sequence
MRNSGQYYSVTNFRAQSVGGRTFDVKDTLDSQFDQIYSGQCWGEVICVGWTNIIEGAWNHSTAVEISNSNFQQMLSKPAIVLARTAQSIVRNVWIEHSLCPADFSLSHLIMDMFCVESSNFDVHAWNSRITLNNLSNPTGVNIDLDTGPYLTGVTSWDPATWKINPKWHSNIALPDGSAFPSWDKYFAWPGGSYYFSNISAYEPNHLHTESYGIETRGTIKTGYSAGWRLQNYSEKEMWVRCGTFQNQQANGTAQAAWKASDAGKAYTESVIDFAYNAWLATAAGQAADDAAKTAKRKALSDGAYSKFGSGGLAGQTNFINSLTHWEIDVMGSRMNGKARDQLGFPVSPMNDEMDPLANTTEGLARINILNTKNANSQYTDTGGMLNWITHGDSCILDVRLSEWSGTPALWVKLAPWTLACSFFIRSTGNTHFEAGSWSMFKWDGSMQEMAPGAAGSIPIAGGLKAGQRKWSVHNDKAGIGINTDGTISLATAAPAKLPTTIDIASVQAWVQVNIGGVDCLIPAIKIPT
Physico‐chemical
properties
protein length:529 AA
molecular weight: 57719,92820 Da
isoelectric point:5,77737
aromaticity:0,10775
hydropathy:-0,25577

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJH95984.1
1 529
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0030
Central domain 11 239 230 0,9728
C-terminal 240 529 289 0,9101
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-239
C-terminal
240-529

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Nafs113
[NCBI] 		2894291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJH95984.1 [NCBI]
Genbank nucleotide accession
OK570186 [NCBI]
CDS location
range 41916 -> 43505
strand +
CDS
CTGCGCAACTCCGGCCAGTATTACAGTGTGACCAACTTCCGCGCTCAGAGTGTCGGCGGTCGTACGTTCGATGTTAAAGACACACTGGACAGCCAGTTCGATCAGATCTATTCCGGCCAGTGCTGGGGTGAAGTGATCTGCGTAGGCTGGACCAATATTATTGAGGGTGCCTGGAACCATTCGACAGCTGTCGAAATCAGTAATAGCAACTTCCAGCAGATGTTAAGCAAACCGGCCATCGTGCTGGCACGAACCGCGCAATCTATCGTCCGTAACGTCTGGATTGAGCATTCACTTTGCCCTGCTGACTTCTCGCTAAGCCACCTGATTATGGATATGTTCTGCGTCGAATCGTCAAACTTTGACGTTCACGCGTGGAACTCACGCATTACGCTGAACAACCTGTCTAACCCGACTGGCGTGAACATCGATCTGGACACCGGCCCTTACCTGACCGGCGTCACCAGCTGGGATCCAGCCACCTGGAAGATCAACCCTAAATGGCATAGCAATATTGCATTGCCAGATGGTTCTGCGTTCCCGTCATGGGACAAATACTTCGCGTGGCCGGGCGGTTCGTATTACTTCAGCAATATTTCGGCATACGAACCAAACCATCTGCACACTGAAAGCTATGGCATCGAAACCCGTGGGACCATTAAGACGGGTTATAGTGCCGGGTGGCGTTTGCAGAACTACAGCGAAAAGGAAATGTGGGTCCGCTGCGGTACGTTCCAGAACCAGCAGGCCAATGGCACCGCTCAGGCAGCATGGAAGGCTTCAGATGCCGGTAAAGCCTATACCGAATCTGTTATCGACTTCGCCTATAATGCCTGGCTGGCAACCGCCGCAGGGCAGGCTGCTGACGACGCAGCGAAGACGGCAAAACGGAAGGCGCTCAGTGATGGGGCTTATTCGAAATTCGGTAGCGGCGGCCTCGCAGGTCAGACCAACTTCATCAACTCGCTGACCCATTGGGAAATCGACGTTATGGGTTCACGGATGAACGGTAAGGCGCGCGACCAGCTGGGCTTCCCTGTTTCGCCGATGAACGATGAAATGGATCCGCTGGCTAACACCACTGAAGGTCTGGCGCGGATCAACATTCTGAACACGAAGAATGCCAACTCGCAATACACCGACACTGGCGGAATGCTGAACTGGATCACCCATGGTGATTCCTGCATCCTGGATGTGCGACTGTCTGAATGGTCCGGCACTCCGGCGCTATGGGTCAAACTGGCCCCGTGGACGCTGGCATGTTCCTTCTTCATTCGCTCCACGGGTAACACCCATTTTGAAGCCGGTTCATGGTCCATGTTCAAGTGGGATGGATCCATGCAAGAAATGGCCCCCGGCGCTGCCGGTAGTATCCCGATTGCTGGTGGTCTGAAAGCCGGTCAGCGTAAATGGTCAGTTCACAATGACAAGGCGGGGATCGGCATCAACACCGATGGCACGATTTCGCTTGCCACTGCGGCCCCGGCCAAACTGCCGACCACTATCGATATCGCCAGCGTCCAGGCGTGGGTTCAGGTGAATATCGGCGGGGTTGATTGTCTTATCCCTGCTATAAAGATTCCGACCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b19192e7576f0e2cdbc6b49438c26514035c33a0d5c895235829ea74645fd5f2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4737
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage Nafs113 Dislers,A., Zrelovs,N. and Kazaks,A. 2012-10-15 — GenBank