Protein

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Genbank accession
YP_010671119.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,78
TF
Evidence RBPdetect2
Probability 0,78
Protein sequence
MSSKVRDSIEALRGSNSSIKDALATKAVASTVQSSLDAKASLTGSETLTNKTLSSPKIILTQSTSSLPTEEGVMEWDTDDNSIAVGDGTGTKVFRPNAWELIGSYSFTNVANFPITNLAAFKTLRIVGDLALTSGGLGFIQLSSDNGSTFTTSGNHSLAYYGYSTAVVNGTSSTAVGYQMTVTTLANDPSLITATLINLNKASTIKYMITHFTGLVTSSLHAGVTLASKSATLTGSQNAIRFIASAGNITGNIVLEGIRG
Physico‐chemical
properties
protein length:260 AA
molecular weight: 26951,90020 Da
isoelectric point:6,83179
aromaticity:0,06154
hydropathy:0,08231

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_TM30
[NCBI] 		2509764 Uroviricota > Caudoviricetes > Kleczkowskaviridae > Cuauhnahuacvirus TM30 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010671119.1 [NCBI]
Genbank nucleotide accession
NC_070966.1 [NCBI]
CDS location
range 177671 -> 178453
strand -
CDS
ATGTCGAGCAAAGTTAGAGACTCAATTGAAGCATTACGAGGATCTAACTCCTCGATTAAAGACGCACTAGCTACAAAGGCAGTCGCATCAACTGTTCAGTCAAGTTTAGACGCCAAAGCATCCTTGACTGGATCTGAAACACTTACTAATAAAACTTTATCGAGTCCTAAGATTATTCTCACTCAAAGCACATCATCTCTTCCAACCGAAGAGGGTGTGATGGAATGGGATACCGACGATAACTCTATAGCAGTAGGTGATGGGACTGGCACGAAAGTATTTAGACCTAATGCCTGGGAACTTATTGGATCTTACTCATTTACGAACGTTGCAAACTTTCCTATTACTAATCTAGCAGCATTTAAGACTCTGAGAATTGTTGGTGACTTAGCACTGACTTCAGGTGGTTTAGGATTTATTCAATTAAGTTCAGATAACGGATCGACATTCACAACGAGTGGAAATCATTCTTTGGCTTATTATGGATATAGTACAGCAGTTGTAAATGGTACCTCAAGTACTGCAGTTGGTTATCAAATGACAGTTACTACATTGGCTAATGATCCTTCTCTGATTACTGCAACGTTGATTAATCTTAATAAAGCATCAACTATCAAGTATATGATTACCCACTTTACAGGACTAGTTACAAGTAGCTTGCATGCAGGAGTTACACTAGCGTCTAAGTCAGCTACTTTAACAGGTAGTCAAAATGCTATTAGATTTATTGCATCTGCAGGTAACATCACTGGAAATATTGTTCTAGAAGGGATTAGAGGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
4da338b5f993625e7779663c7b08c437052470d3e9238b3b652eca751dee5968
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8574
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank