Protein

View in Explore
Genbank accession
ACY75783.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAVFYIDGVAQDTLAFTRGSIYRFDQSNASNSADVLTLSETDDGENNAGSPYATGVSYWINNVEVNRTTYLSNFAAATSRFFQIEVDAGAPSTLYYYAVGTAAMGGTINVTG
Physico‐chemical
properties
protein length:112 AA
molecular weight: 11951,85390 Da
isoelectric point:4,05003
aromaticity:0,13393
hydropathy:-0,05804

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage PSS2
[NCBI] 		658401 No lineage information
Host Prochlorococcus marinus str. MIT 9313
[NCBI] 		74547 Bacteria > Cyanobacteria > Prochlorales > Prochlorococcaceae > Prochlorococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACY75783.1 [NCBI]
Genbank nucleotide accession
GU071090.1 [NCBI]
CDS location
range 61960 -> 62298
strand +
CDS
ATGGCTGTCTTCTATATCGACGGAGTAGCTCAGGACACCCTGGCCTTCACACGTGGATCCATTTATCGCTTTGACCAATCCAACGCCAGCAACTCTGCTGATGTTCTAACCCTGTCGGAAACTGACGACGGCGAGAACAATGCTGGATCACCTTACGCAACAGGCGTGAGCTATTGGATCAACAACGTTGAAGTGAACCGGACTACATACCTTTCGAACTTCGCGGCTGCTACAAGCAGGTTCTTCCAAATCGAGGTTGATGCCGGAGCGCCGTCAACCCTTTACTACTACGCAGTCGGAACCGCAGCAATGGGCGGAACGATCAACGTAACTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7e06b057ecb09c3af83e07b66a00a142c86b03d8fc31a630ce3ec16681d637d9
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9712
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage PSS2 Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Koehrsen,M., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Borenstein,D., Chen,Z., Engels,R., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hepburn,T., Howarth,C., Jen,D., Larson,L., Lewis,B., Mehta,T., Park,D., Pearson,M., Richards,J., Rizzolo,K., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., Walk,T., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank