Protein

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Genbank accession
WIK99939.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MKLTTEQKVAIREILKTKLSMGVSNVVFEKSDGTIRVMKGTRDADFMPTMQTGKLTESTRKESTGMIPVFDVELGAWRGFSIDKLISVNGMKVEHLLQFIGK
Physico‐chemical
properties
protein length:102 AA
molecular weight: 11409,30600 Da
isoelectric point:9,57093
aromaticity:0,05882
hydropathy:-0,15686

Domains

Domains [InterPro]
IPR024401
STR
13–86
IPR024401
WIK99939.1
1 102
Architecture
STR
STR 13-86 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage GADU22
[NCBI] 		3050704 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli str. K-12 substr. DH10B
[NCBI] 		316385 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Escherichia > Escherichia coli

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WIK99939.1 [NCBI]
Genbank nucleotide accession
OQ944321.1 [NCBI]
CDS location
range 17421 -> 17729
strand -
CDS
ATGAAACTGACGACTGAACAAAAAGTAGCAATTCGCGAAATTTTGAAAACTAAATTGTCCATGGGTGTTTCAAACGTAGTTTTTGAAAAGTCTGATGGTACTATTCGTGTTATGAAAGGTACTCGTGATGCAGACTTTATGCCAACCATGCAAACCGGTAAATTGACTGAATCTACTCGGAAAGAATCTACTGGCATGATTCCAGTATTTGATGTTGAACTTGGTGCATGGCGAGGTTTTTCTATTGACAAATTGATTTCTGTTAATGGTATGAAAGTTGAGCATTTACTCCAATTTATTGGTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bd09cccd5c3ce2d0e5d142a31f72f7ab85ba9029582e165e1d831cc528a3bfec
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8478
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation of Klebsiella phage GADU22 from urine sample of a patient with urinary tract infection Salih,H., Yilmaz,U.I., Karaynir,A., Basgoz,B.B., Bozdogan,B. and Hosbul,T. 2024-01-18 — GenBank