Protein

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Genbank accession
AGE60867.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MGNATRSTNLGLYSWESQDKLSESIPQVSSNFQALDEILSRAWIDIKSYGYDAKGNYNLSTGNGTDDAPAFQKALDRAQNRTSSVTIFVPDGTYRLGSELRIYSNTAIIMSPNATLVRDHSKYLLFNGVRAADGGSPISGYNGDGNILIQGGTLTGQGNKQTAKASIVHFGHAQNITFDNVTLKDCSNSHHIEFNACKDVYVKNCNFLGWYGTVDTYNEAIQLDLATPELTTVAGGDYTPCKNVYIDNTYFGKSTTAGSKPIGRGIGSHSGAINRWHENVHITNCTFDSTVEWACRAYAYKDFYFTNNQIINCGRGVNVRSNISTDDKDTIDANTGAQTGKSQNVARYVIANNTFGGSMTGGRAIEIYGEETGRIYYATVTGNTINVTSVTTGEMVYLNYVRYATVTGNNVSGDSKATCIGLNGNTTEVTIGNNICAFGDRGIAVYGAKVVMQNISILGNTIRGMQRSGIHLDSIGGFACSGNSIFDCNKASGGDENHIRVVVGNKNGTISGNLCTVPCPTSIYVSNTNSRINVTGNVLSGGLTNNSSGGASSNNI
Physico‐chemical
properties
protein length:556 AA
molecular weight: 59381,95470 Da
isoelectric point:6,55146
aromaticity:0,08453
hydropathy:-0,31061

Domains

Domains [InterPro]
DC_0968
ATT
1–41
DC_0968 IPR011050 IPR006626 IPR006626 IPR006626 IPR006626
IPR012334
STR
44–440
IPR012334
IPR024535
ENZ
59–218
IPR024535 IPR006626 IPR011050
IPR006626
Unmapped
197–218
IPR006626 IPR006626 DC_1312
AGE60867.1
1 556
Architecture
ATT
STR
ATT 1-41 | STR 42-556
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGE60867.1
1 556
Domain Start End Length (AA) Confidence
N-terminal 1 47 47 0,9750
Central domain 48 545 499 0,9943
C-terminal 546 556 10 0,3781
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-47
Central
48-545
C-terminal
546-556

Taxonomy

  Name Taxonomy ID Lineage
Phage Bacillus phage Gemini
[NCBI] 		1273743 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Bacillus pumilus BL8
[NCBI] 		1189615 Bacillota > Bacilli > Caryophanales > Bacillaceae > Bacillus > Bacillus pumilus

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGE60867.1 [NCBI]
Genbank nucleotide accession
KC330681.1 [NCBI]
CDS location
range 18914 -> 20584
strand +
CDS
ATGGGTAACGCTACAAGATCAACTAATTTGGGTCTATACAGTTGGGAGTCACAAGACAAGCTTTCCGAGTCTATCCCTCAGGTAAGCTCAAACTTCCAAGCACTAGATGAAATATTGAGCCGTGCATGGATTGATATAAAGTCTTATGGCTATGACGCAAAAGGAAACTACAATTTAAGCACTGGAAATGGTACAGATGACGCTCCAGCATTCCAAAAGGCTTTAGACAGAGCACAAAACAGAACGAGTAGCGTCACTATCTTTGTGCCAGATGGAACATACCGACTAGGTAGTGAACTGAGAATATACAGCAATACAGCCATCATAATGAGCCCTAACGCCACCCTAGTCAGAGATCACTCAAAGTATCTCTTGTTCAACGGAGTAAGAGCCGCAGACGGTGGGTCGCCTATCAGTGGGTACAACGGAGATGGCAACATTCTTATCCAAGGTGGAACCCTAACAGGTCAAGGAAATAAGCAGACAGCCAAAGCAAGTATTGTCCACTTTGGTCACGCTCAAAATATCACCTTCGACAACGTAACCCTTAAGGATTGTTCTAACTCGCATCATATCGAGTTTAACGCTTGCAAAGATGTATACGTTAAGAATTGTAATTTCCTCGGCTGGTACGGAACAGTTGATACATACAACGAGGCTATCCAGTTAGACTTAGCAACTCCAGAGTTAACAACCGTGGCTGGCGGTGACTATACCCCTTGTAAAAATGTCTATATTGACAACACATACTTTGGGAAGTCAACCACAGCAGGGTCAAAACCAATTGGTCGAGGAATCGGGTCTCACTCAGGGGCTATCAACCGTTGGCACGAAAACGTTCATATTACTAATTGCACATTTGATAGCACTGTAGAGTGGGCTTGTCGTGCTTATGCTTACAAGGATTTTTACTTTACAAACAATCAGATTATAAATTGTGGTCGTGGTGTCAACGTGAGGTCTAATATCTCAACGGATGACAAAGATACGATAGATGCCAACACAGGTGCTCAAACAGGTAAATCTCAAAACGTAGCTAGGTATGTTATTGCCAATAACACCTTTGGAGGTAGTATGACTGGTGGTCGAGCTATCGAGATTTACGGTGAAGAAACTGGGCGTATTTATTACGCAACAGTAACAGGCAATACGATCAACGTTACCTCTGTTACAACAGGTGAGATGGTTTACCTCAACTATGTTAGATACGCAACAGTAACAGGCAACAATGTTAGCGGAGATAGCAAAGCTACTTGTATTGGTCTCAATGGAAACACTACAGAGGTTACTATCGGAAACAACATTTGTGCGTTTGGTGATCGTGGTATCGCCGTTTATGGTGCCAAGGTGGTCATGCAGAACATCAGCATCTTAGGTAACACAATAAGAGGGATGCAAAGAAGCGGTATACACCTTGACAGTATTGGTGGGTTCGCCTGCTCTGGTAATAGCATATTCGATTGTAACAAGGCTTCTGGCGGAGATGAAAACCATATCAGGGTTGTTGTAGGTAATAAAAATGGTACAATCAGCGGAAACCTTTGTACAGTTCCTTGCCCCACTAGTATTTATGTTTCAAACACAAATAGTCGTATTAACGTCACAGGGAATGTATTATCTGGTGGTCTGACAAATAATTCATCGGGCGGAGCTTCTTCAAACAACATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c6947aa1e0d7776d74c7b42f1edfa6ccf21e434e14f21c5c070360d48ebb6ac9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8552
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genomic characterization of six novel Bacillus pumilus bacteriophages Lorenz,L., Lins,B., Barrett,J., Montgomery,A., Trapani,S., Schindler,A., Christie,G.E., Cresawn,S.G. and Temple,L. 2013 23906709 GenBank