Protein

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Genbank accession
QDK02788.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLAHLAGVDLVEAAANYRRPHDYTGDLEQKSDLPIHVMGGECVTRAVPRDAAIRAMNDTGAMSQRSKMSARKQIILGVAFAAAFALLIGVAIAVAQPDSDSTSAPVAESTAPPSGGGVVWIGDSYISGDGAPAGGGLALLAANELGLTPTISADPRSGYTRPGRRGFTTGELIAEAPATVGTQLVVIASGYNDDLGSPPNTDRLRTEAASAISAAEQKWPRARLVVLGPWTPGGAPTVNQTAANEALGEVAAAAGVTYIDTLAPPLVTPEMIGADKIHPSPSGHQQIAEELVERLNAPTA
Physico‐chemical
properties
protein length:300 AA
molecular weight: 30667,17930 Da
isoelectric point:4,94956
aromaticity:0,04000
hydropathy:-0,00400

Domains

Domains [InterPro]
IPR036514
STR
95–296
IPR036514
SSF52266
STR
115–296
SSF52266
SSF52266
STR
117–296
SSF52266
IPR013830
ENZ
121–285
IPR013830
QDK02788.1
1 300
Architecture
STR
STR 95-296 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Gordonia phage Squiddly
[NCBI] 		2593337 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDK02788.1 [NCBI]
Genbank nucleotide accession
MN096370.1 [NCBI]
CDS location
range 28048 -> 28950
strand -
CDS
GTGTTGGCGCACCTGGCCGGGGTCGACCTAGTTGAAGCGGCGGCGAATTACCGTCGCCCGCACGACTATACCGGAGATCTCGAACAAAAAAGCGACCTGCCGATTCACGTTATGGGCGGTGAATGTGTGACGCGGGCCGTCCCTCGCGATGCGGCAATTCGGGCCATGAACGATACTGGCGCAATGTCTCAACGGTCGAAGATGTCCGCTCGGAAACAGATCATCCTCGGCGTGGCTTTCGCCGCGGCCTTCGCGCTCCTGATCGGCGTCGCCATCGCCGTCGCGCAACCCGACTCGGACAGCACCTCAGCACCAGTTGCGGAGTCCACCGCACCACCCAGTGGCGGCGGGGTGGTGTGGATCGGTGACAGCTACATCAGCGGCGACGGCGCCCCGGCCGGCGGCGGGCTCGCGCTCCTGGCCGCGAACGAACTCGGCCTCACCCCGACCATCTCGGCCGACCCGCGCTCGGGCTACACCCGCCCCGGTCGCCGCGGCTTCACCACCGGCGAGCTCATCGCCGAAGCGCCCGCCACCGTCGGCACCCAGCTCGTCGTCATCGCCAGCGGCTACAACGACGACCTCGGATCGCCGCCCAACACCGATCGCCTACGCACCGAGGCGGCGTCGGCGATCTCGGCGGCCGAGCAGAAGTGGCCGCGCGCCCGACTGGTGGTCCTCGGACCGTGGACACCAGGCGGTGCGCCGACCGTCAACCAGACCGCAGCGAACGAGGCGCTCGGCGAGGTCGCCGCAGCCGCCGGAGTGACCTACATCGACACACTCGCGCCGCCGCTGGTGACACCAGAGATGATCGGCGCCGACAAGATCCACCCGAGCCCGAGCGGGCACCAGCAGATTGCCGAGGAACTCGTCGAGCGCCTGAACGCGCCTACAGCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
d9c4ccb4a9e9fa9fb430326a263b540cab88bc64de76b265ff3a72905fc7aa7f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7386
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50