Protein

View in Explore
Genbank accession
QIG72989.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MASPEWNQSAATASSYGRKGAAISPSSSDIDPRPKAVIMTATGDITIVPDKNADASTITFTGCPVGFIVPYVVRRVTACTGSCASIDA
Physico‐chemical
properties
protein length:88 AA
molecular weight: 8995,06250 Da
isoelectric point:6,00745
aromaticity:0,05682
hydropathy:0,10000

Domains

Domains [InterPro]
DC_0304
STR
1–88
DC_0304
IPR061180
Unmapped
8–84
IPR061180
QIG72989.1
1 88
Architecture
STR
STR 1-88
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Rhizobium phage RHph_N3_2
[NCBI] 		2509747 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG72989.1 [NCBI]
Genbank nucleotide accession
MN988526.1 [NCBI]
CDS location
range 41063 -> 41329
strand +
CDS
ATGGCCTCTCCTGAATGGAACCAGAGCGCAGCGACGGCATCGAGCTACGGTCGCAAGGGTGCGGCTATATCGCCTAGCTCGTCTGACATCGACCCGCGTCCAAAGGCCGTTATCATGACGGCAACGGGCGACATCACCATTGTCCCGGATAAGAACGCGGATGCATCCACCATCACGTTCACCGGCTGCCCTGTTGGCTTCATCGTCCCTTACGTTGTCCGTCGCGTAACGGCGTGCACTGGGTCGTGCGCGAGCATTGATGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
191c980c3beb799274548a360485fbaddef0ef2a6a48df3b434ee597599ba049
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,8500
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Patterns of diversity and host range of bacteriophage communities associated with bean-nodulatin bacteria Vann Cauwenberghe,J., Santamaria,R.I., Bustos,P., Juarez,S. and Gonzalez,V. 1998-01 — GenBank