Protein

View in Explore
Genbank accession
QBX06895.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,85
Protein sequence
MRQILPSAKAYLANNDKIRLAYLVSIELPGSTGNNAVYAYMTDYMRDISYGGILFQSGKIKTISSHKQNRTLTVGSLSFSVTGTDANEVIKLVQSGVSFLDRSISIYQAIIDDNGEILPVDPDTNGPLLFFRGKIVGGGIKESNTVSGVGTSVITWNCSNEFYDFERVAGRFTDDASHRGLEIVNGELLPSHGAKRPEYQEDYGFFHANKSVNFLAKYQVKEERYKLESKKKLFGLSKSYSLKKYYETVTKEVDLDFNLAAKFIPVVYGTQKVPGIPVFADTERNNPNVVYVVYAFCEGEIEGFLDFQFGDAPMICTDQTDSTSRTCFGQKRVSGDTMARISTGLPSTSLSEHGQEYKYNDGNGDIRIWTFHGKPDQTVATVLRDIAAANNFFLQGENGNGPEYWDSRYKLLDTAYAVIRFTITENRTDIPEVSAELSGRKVKVYQADGSVKMDKTSQNGVWQTFDYLTSTTFGASIPIDRMVIGDWRKEADLLNIVDTSYQTSWQPFWRYVGWESWTAENRQIMQMNTILDNSNSVFKNVQELLESFQGALNNLSGIFRITVEKDSKTPLELNFLDTYGDLELSDTTGRNKYNSVQASLIDPTLNWKTNSITFYNSKFKNEDRGVDKKLQLSFANITNYYTARSLADRELKKSRYSRSLSFSLPYKFLGIEPNDPVVFTYDRYGWNKKFFLVDEVENTRDGKINVTLQEYGEDVFINSTQVDNSSESVPEISNNVLPPRDFKYTPTPGGRVGDVGKNGELSWLPSLTPNVVYYSIRKSDRVDPYIVQQTAFTPNARMFQDIVGEPAGLTIFEIRAVDINGRRSSPVTISVDLNSAKNLSVVENFRVLNLSPDPTEWVGPDLELGWDKLQEEDLISGIFYTLEIRDSTNKLLRSVKITSLYNYSYLLSYNKLDYKANNSNTLGIYRALQPRIQAEGPRGEKSVAWAYI
Physico‐chemical
properties
protein length:948 AA
molecular weight: 107033,67260 Da
isoelectric point:5,39376
aromaticity:0,11603
hydropathy:-0,43217

Domains

Domains [InterPro]
DC_0187
STR
232–932
DC_0187
IPR032876
ATT
593–696
IPR032876
QBX06895.1
1 948
Architecture
STR
ATT
STR
STR 232-592 | ATT 593-696 | STR 697-932 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QBX06895.1
1 948
Domain Start End Length (AA) Confidence
N-terminal 1 312 312 0,9395
Central domain 313 541 230 0,4042
C-terminal 542 948 406 0,0030
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-312
Central
313-541
C-terminal
542-948

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage Spivey
[NCBI] 		2562542 Uroviricota > Caudoviricetes > Demerecviridae > Sugarlandvirus sugarland >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX06895.1 [NCBI]
Genbank nucleotide accession
MK630230.3 [NCBI]
CDS location
range 87983 -> 90829
strand -
CDS
ATGAGACAGATCCTTCCTTCTGCGAAAGCCTACCTTGCCAACAATGACAAGATACGATTAGCGTATCTTGTCTCTATCGAACTCCCGGGGTCCACGGGTAATAATGCTGTTTACGCTTATATGACGGACTACATGAGAGATATCAGCTACGGTGGTATACTCTTCCAATCAGGGAAAATTAAAACAATTAGCAGTCACAAACAAAACCGCACGTTAACCGTCGGTAGTTTGAGCTTCAGTGTTACTGGTACGGATGCCAATGAAGTCATTAAGCTCGTGCAAAGTGGTGTATCATTTTTAGATCGCTCTATTTCTATATATCAGGCGATCATCGACGACAATGGGGAAATCCTTCCAGTGGACCCAGATACTAACGGCCCGTTACTCTTCTTTAGGGGTAAGATTGTGGGCGGTGGTATTAAAGAAAGTAATACAGTATCCGGAGTTGGTACTTCTGTTATAACTTGGAACTGTTCTAACGAATTCTACGATTTTGAACGAGTTGCTGGACGCTTCACAGACGACGCCTCCCACCGAGGGCTTGAGATTGTAAATGGGGAACTACTACCCTCTCACGGTGCCAAACGACCGGAATATCAAGAGGACTACGGATTCTTCCATGCCAACAAGAGCGTTAACTTCCTAGCTAAATATCAAGTAAAAGAAGAACGATACAAGCTAGAATCTAAGAAGAAATTATTTGGTCTCTCCAAGAGCTACAGCCTTAAAAAGTATTATGAGACTGTCACTAAAGAAGTAGACCTGGATTTCAACCTTGCAGCTAAATTTATTCCTGTAGTATACGGTACTCAAAAAGTTCCTGGTATCCCGGTTTTCGCGGATACAGAAAGAAACAATCCAAACGTTGTGTATGTGGTCTACGCGTTCTGTGAGGGTGAGATTGAAGGATTCCTCGACTTCCAGTTTGGAGACGCTCCTATGATCTGTACTGATCAAACTGACAGTACCTCTCGTACATGCTTTGGACAAAAAAGAGTATCGGGAGATACTATGGCAAGAATCTCCACAGGACTTCCATCAACATCTCTCTCAGAGCATGGTCAAGAATACAAGTACAATGACGGTAACGGGGATATACGAATCTGGACATTCCACGGTAAGCCAGACCAGACGGTAGCTACGGTACTAAGAGACATTGCTGCTGCTAACAATTTCTTCCTACAGGGAGAGAACGGTAATGGACCGGAGTACTGGGATTCTAGATACAAGCTATTAGATACTGCTTACGCTGTTATACGGTTTACTATTACCGAGAACAGGACCGATATTCCTGAAGTGTCCGCAGAATTAAGCGGCCGTAAGGTAAAAGTGTACCAGGCAGACGGTTCTGTTAAAATGGATAAAACCAGTCAGAATGGCGTATGGCAAACATTTGACTACCTAACCTCCACTACTTTTGGTGCAAGTATTCCTATAGATAGAATGGTGATTGGTGACTGGAGAAAAGAGGCCGATCTATTAAACATTGTAGACACCTCTTATCAAACTAGTTGGCAGCCGTTCTGGAGATACGTTGGGTGGGAGAGTTGGACAGCTGAAAACAGACAAATAATGCAAATGAACACAATCCTGGATAACTCCAACTCTGTGTTCAAGAACGTGCAGGAGCTATTAGAATCCTTCCAGGGGGCGTTAAACAACCTATCAGGTATTTTCCGCATTACCGTAGAGAAAGATTCAAAAACTCCGCTAGAACTTAATTTCCTAGATACTTATGGGGACCTGGAGCTCTCAGATACTACAGGTCGTAATAAGTACAACTCAGTTCAGGCGTCTCTGATTGATCCTACCCTGAACTGGAAAACCAACTCTATAACGTTCTATAATTCTAAGTTTAAGAATGAAGATCGTGGGGTTGACAAGAAACTTCAACTTTCTTTTGCTAACATAACCAACTACTACACTGCCAGAAGTCTGGCAGATAGGGAACTTAAAAAGTCTCGCTACTCGCGTTCTCTGAGCTTCTCTTTACCTTACAAATTCCTTGGTATAGAACCTAACGATCCTGTAGTATTCACCTACGATCGTTATGGCTGGAATAAGAAGTTCTTCCTAGTAGATGAGGTGGAGAACACAAGAGATGGTAAGATAAACGTAACTCTTCAGGAGTATGGTGAGGATGTATTTATTAACTCAACGCAGGTGGATAACAGTAGTGAAAGCGTACCTGAAATATCCAATAATGTCCTGCCTCCTAGAGACTTTAAGTACACTCCTACGCCTGGTGGAAGGGTGGGTGATGTTGGTAAAAACGGAGAGCTTTCATGGCTACCTAGCTTAACGCCTAACGTAGTTTATTACTCGATACGTAAATCAGACCGTGTGGATCCTTATATTGTGCAGCAGACTGCTTTCACTCCTAATGCTAGGATGTTCCAAGATATCGTGGGTGAGCCCGCTGGACTGACTATTTTCGAAATCCGCGCTGTTGATATTAATGGTCGTCGTAGCTCTCCAGTAACAATTTCTGTAGATTTGAATTCAGCTAAGAACCTTAGTGTGGTGGAAAACTTCCGGGTGCTTAACCTATCTCCTGATCCTACGGAATGGGTTGGACCTGACCTAGAGCTAGGATGGGATAAGCTGCAAGAAGAGGATCTGATTTCAGGGATTTTCTACACGCTTGAAATAAGAGACAGCACTAATAAACTGCTTAGATCCGTGAAGATCACCAGTTTATATAATTACAGTTATCTGTTGAGTTACAATAAGCTCGACTATAAGGCCAACAACTCGAATACTTTGGGGATTTATAGAGCACTTCAGCCAAGAATTCAGGCAGAGGGACCAAGGGGCGAGAAGTCGGTTGCATGGGCATATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3bc8206e7fe76e1bf2b14a90e31af29a6ed4541444986973a1ad4331c68474ed
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7995
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Klebsiella pneumonaie siphophage Spivey Lessor,L., Michalik,J., Gill,J. and Liu,M. 2019-10-31 — GenBank