Protein

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Genbank accession
UYE97257.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,94
Protein sequence
MADLRSKFIEDYAGGLLNVSRQELASTGEVLSQDGFLSDATLFVEDGSGTKSGLKLAKALCEVVDPTTDEGAVNVRYANRTYASIRDLKIFSTAIASAQAALADASSTSITNLENAFQLLEDSQDTLSNRFESRTEKVDEQLNKLDKLPEMELEMAALSASVSGVDAKINSSLADVATNKLNVSSVISEFAKGMEGDDTDLQKALKSIASIKTTKTIDLENVTSGITLSTGSSQQDPDSKKINSLVFKGFNSKAFAACAEIYSEVDDPLVYDPGNTGTHGVPGSLHFSVTKQGTTSPVQRMRINQQGAFALQSTASCLFVSSESAAGATNAVFIGRHSATTFPSGTATSYIWTNGGLANYQSNNSDLSDIREKKNIEPLDSTWDKVKSWELKKYHYNFDEDSSDKRYGVIAQDLEETCPDLVTIWNEDNAEDAKLGVKAQQMDWMAIRTLQEAQLKIEQLEAKVAALEAAG
Physico‐chemical
properties
protein length:471 AA
molecular weight: 50814,80220 Da
isoelectric point:4,63405
aromaticity:0,06582
hydropathy:-0,34565

Domains

Domains [InterPro]
DC_0421
STR
10–471
DC_0421
Coil
Unmapped
110–130
Coil IPR030392
IPR030392
CHP
368–423
IPR030392 Coil
UYE97257.1
1 471
Architecture
STR
STR 10-471
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-TIM54
[NCBI] 		1137744 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Synechococcus sp. WH 8102
[NCBI] 		84588 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYE97257.1 [NCBI]
Genbank nucleotide accession
OP053362.1 [NCBI]
CDS location
range 51209 -> 52624
strand -
CDS
ATGGCAGACCTTAGATCAAAATTTATCGAAGACTACGCAGGTGGTCTTTTAAACGTCTCTAGGCAAGAATTAGCTAGTACAGGTGAGGTTCTTTCTCAAGATGGGTTCCTGTCAGATGCGACTCTTTTTGTAGAAGATGGCAGCGGAACAAAAAGCGGACTTAAGCTAGCGAAGGCACTTTGTGAAGTGGTTGACCCCACCACAGATGAGGGAGCTGTTAATGTAAGATACGCAAACAGAACTTACGCAAGTATCAGAGACTTAAAGATTTTTTCTACTGCAATTGCTTCTGCCCAAGCAGCTCTTGCGGATGCGTCTTCTACGTCTATCACAAACTTAGAAAACGCCTTCCAGTTATTAGAAGATTCTCAGGACACCCTTTCAAACCGATTTGAGTCTAGAACAGAGAAAGTTGATGAGCAATTAAACAAATTAGATAAGCTCCCAGAGATGGAGCTAGAAATGGCCGCTTTATCGGCTTCAGTGTCAGGTGTTGATGCAAAAATAAACTCGAGCTTAGCAGATGTAGCTACAAACAAACTTAACGTATCTTCTGTTATTTCAGAGTTTGCTAAAGGAATGGAAGGTGACGATACTGACCTTCAAAAAGCATTGAAATCTATAGCATCTATTAAGACAACAAAGACTATAGATTTAGAAAACGTAACTTCAGGCATTACATTAAGCACTGGTAGCTCACAACAAGACCCAGACAGTAAGAAAATTAATTCTTTAGTATTTAAAGGATTTAACAGCAAAGCTTTTGCTGCTTGCGCAGAGATTTATTCAGAGGTAGATGATCCTCTAGTATATGATCCAGGAAACACCGGAACTCATGGTGTTCCAGGCTCTCTTCATTTTTCAGTTACAAAACAGGGTACAACATCTCCTGTTCAAAGGATGAGGATTAATCAACAAGGAGCATTTGCCCTTCAATCAACCGCAAGTTGTCTATTTGTTAGCAGCGAATCAGCTGCCGGGGCCACAAACGCGGTATTTATCGGAAGACACAGCGCAACTACTTTCCCAAGCGGTACAGCAACTTCTTATATTTGGACAAATGGAGGATTAGCTAATTATCAATCAAATAACTCTGATTTATCAGACATAAGAGAGAAGAAAAATATCGAACCCTTAGATAGCACCTGGGATAAAGTAAAATCCTGGGAGCTTAAAAAGTATCACTACAACTTTGACGAAGATAGTTCTGACAAGAGATACGGCGTTATTGCCCAAGACTTAGAAGAAACTTGCCCAGATCTTGTTACGATCTGGAACGAAGATAATGCAGAAGATGCAAAGCTAGGTGTAAAAGCCCAACAAATGGATTGGATGGCGATTAGAACCTTACAAGAGGCTCAATTAAAAATTGAACAACTAGAGGCTAAAGTTGCAGCTTTAGAGGCCGCTGGTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
8ded67bafa7a2df002153ef2ca950efd33727bd00c219c88566827f39e6e8bac
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6299
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Widespread yet persistent low abundance of TIM5-like cyanophages in the oceans Baran,N., Carlson,M.C.G., Sabehi,G., Peleg,M., Kondratyeva,K., Pekarski,I. and Lindell,D. — — GenBank