Protein

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Genbank accession
XIJ72041.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,85
TF
Evidence RBPdetect
Probability 0,88
TF
Evidence RBPdetect2
Probability 0,95
Protein sequence
MALRIDKINLKATDVAALPVYGLITAGTDLNTLDGRVYGKYWQSGNANSPTSLNYPVAAAGTLLVLKNNASSLSTSCTQIYLPYNSNEIYSRSFYNSWTAWSRFASIDMDGANSTIKSLTGLTTALSIEQGGTGVVSKEAFRQSYNVPTKDESLLSENNLSDLADRAAAWLNVRPIGSTPLAGDPVNDYDAVTKRWVENKINTGTVGPTMNGVMNYGVGDFHLRDSRAYIQPYEVVSDGQLLNRADWPELWAYAQMVGAIDDSVWLADKFQRGRYSLGDGTTTFRVPDRNGVQQGSIRALYGRGDGGNSSANGQLFESAAPNITGTVPSYSSTSYAQVFGSAAAGAFFVNNGIFPNGDGDAIPSTGNIALTGRYNTLNFDASHSSPIYGAAQDEILTRNFVGVWVIRASGGFVAANTSWSVINGDAVKPSASTTVYGGSVLSEYKVGTSSEAVSTLRAKATIDGNYSTELLIENKSTGKSSSAQLVDTGNFVADRFEARLVTGMAWSQTGWVQGTFSQSEANIGSTFNFNSILSGSQYSTAGYKTSAHFGLIHNDLGSFADSCWHVSGDADNKYGVRLKIQPNNNSIYFYSWWPNGAATYTLQLNAISDSRLKHDIKAIDATKSIEVLKGLEFQSFIYNNDEKSRIRRGVIAQQVETIEPLYVKTRRFYNDDGVEQEQKELDTTPMLLDTMHVVQDLIKRIEDLEKELEQLKVQLVSQ
Physico‐chemical
properties
protein length:718 AA
molecular weight: 78034,58780 Da
isoelectric point:5,20880
aromaticity:0,10028
hydropathy:-0,30139

Domains

Domains [InterPro]
cd19958
STR
22–105
cd19958 DC_1651 Coil
cd19958
STR
25–105
cd19958 IPR030392
IPR030392
CHP
608–660
IPR030392
DC_0409
RBD
639–718
DC_0409
XIJ72041.1
1 718
Architecture
STR
STR
RBD
STR 22-105 | STR 146-659 | RBD 660-718
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XIJ72041.1
1 718
Domain Start End Length (AA) Confidence
N-terminal 1 146 146 0,7192
Central domain 147 345 200 0,0515
C-terminal 346 718 372 0,8549
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-146
Central
147-345
C-terminal
346-718

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage HMD-P3
[NCBI] 		3374743 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XIJ72041.1 [NCBI]
Genbank nucleotide accession
PQ462667.1 [NCBI]
CDS location
range 77448 -> 79604
strand -
CDS
ATGGCTCTTAGAATTGATAAAATTAACTTAAAGGCTACTGATGTAGCCGCATTACCTGTATATGGTTTAATTACTGCAGGAACAGATTTAAATACACTTGATGGAAGGGTGTATGGAAAGTACTGGCAATCTGGAAATGCTAACTCTCCTACTTCTCTTAACTATCCTGTTGCAGCTGCAGGTACATTACTAGTCTTAAAAAATAATGCAAGCAGTTTATCAACTTCTTGTACTCAAATTTACTTACCTTATAATAGTAATGAGATATATAGTAGATCTTTTTACAATTCATGGACTGCATGGTCAAGATTTGCTAGTATAGACATGGATGGTGCCAACTCAACTATTAAATCTTTAACAGGTTTAACCACTGCACTTTCTATAGAACAAGGAGGTACTGGAGTAGTATCAAAAGAAGCTTTTAGACAAAGTTATAATGTGCCAACAAAAGACGAAAGTCTATTATCTGAAAATAATTTATCAGATTTAGCAGACCGAGCCGCTGCGTGGCTAAATGTACGCCCTATTGGGTCTACTCCACTTGCTGGAGATCCCGTTAATGATTATGATGCTGTTACTAAGCGTTGGGTAGAGAATAAGATTAACACTGGTACAGTTGGACCTACCATGAATGGTGTTATGAACTACGGTGTTGGTGATTTTCACCTCCGAGATAGTCGTGCGTATATTCAGCCATACGAAGTCGTTTCTGACGGACAGCTCCTTAATAGGGCTGATTGGCCTGAACTTTGGGCATATGCACAAATGGTTGGGGCCATAGATGATTCAGTTTGGTTAGCAGATAAATTTCAGCGTGGCAGATACTCCTTGGGTGATGGCACAACTACTTTCCGTGTGCCAGATCGGAACGGTGTGCAACAAGGATCAATACGTGCTCTTTACGGTCGTGGTGATGGTGGGAATAGTAGTGCAAATGGTCAGCTATTTGAATCAGCTGCGCCTAATATAACAGGTACTGTTCCTAGCTACTCAAGTACTAGCTACGCTCAGGTATTTGGGTCTGCTGCTGCCGGTGCATTCTTTGTTAATAATGGGATTTTTCCTAATGGGGATGGGGATGCGATCCCCAGTACAGGAAATATTGCATTAACTGGGCGCTATAATACATTAAATTTTGACGCCTCACACTCAAGCCCTATCTACGGTGCAGCACAGGACGAAATCCTTACACGAAACTTTGTCGGTGTATGGGTAATCCGTGCTTCTGGTGGATTCGTGGCTGCGAATACCTCGTGGAGTGTCATTAATGGCGATGCTGTCAAACCTTCTGCTAGTACTACTGTTTATGGCGGGAGTGTACTATCTGAGTATAAAGTAGGTACTAGTAGTGAAGCTGTAAGTACATTACGTGCTAAAGCTACTATTGATGGCAACTACTCTACTGAGCTACTAATAGAAAATAAATCTACTGGTAAATCGAGTTCCGCCCAGCTTGTAGATACTGGGAATTTTGTAGCGGATCGTTTTGAAGCTAGACTAGTAACTGGTATGGCGTGGTCTCAGACAGGCTGGGTACAAGGTACTTTTTCTCAGAGCGAAGCGAATATAGGCAGTACATTTAATTTTAATAGTATTTTGAGTGGTTCCCAGTATTCTACTGCGGGGTATAAAACATCTGCACATTTTGGATTAATTCATAATGACTTGGGTTCCTTTGCTGATTCTTGCTGGCACGTATCGGGAGACGCGGATAACAAATATGGTGTACGTTTAAAAATTCAGCCAAACAATAATAGTATTTATTTCTATTCTTGGTGGCCCAATGGCGCAGCAACGTATACTCTGCAGTTAAATGCTATATCTGATTCTCGTTTAAAGCATGATATTAAAGCTATAGATGCAACTAAGTCCATCGAGGTATTAAAAGGATTAGAATTCCAGTCCTTTATATATAATAACGATGAAAAATCTCGTATCCGACGTGGGGTTATTGCGCAGCAAGTAGAGACTATAGAGCCCCTCTATGTAAAGACCAGAAGATTCTATAATGATGACGGAGTAGAGCAGGAACAAAAGGAATTAGATACAACTCCAATGCTTCTTGACACTATGCATGTTGTGCAAGATCTTATTAAAAGGATTGAAGATCTGGAGAAAGAGCTTGAGCAATTAAAGGTACAACTAGTATCACAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
22f75df0c42a6d9f14c32ee08973e3175a76a19073b9a32c4e995a171043966c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6878
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50