Protein

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Genbank accession
YP_010302562.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MSRFRVRNAANNGWHDCVDTPMFIRTHQGDWTPLTPEKFSVRNQWGKRWHLIDDSFDPTYDDPCSNLETGACGGGPTSTTKGSGNGIGSGGREKYDILTGYPAGFDLPDAGRTGFGLVNSFAPPTGRSINRPGIKAIESYDPTGVASRAGLGTYANPNVPYASVHGRGAVITETYYAMPAIEGYVELMIASYAPGGASVDVYHMGARVASTCGKLTGRSRIKFQFDPDASDMRIMVRVRTTQGYGWSLEVYPPRLAAPSDRGGLALDSQASYDVINFPDVIHPDYIGSPIFPAPCHATVWPIAERIQNANAFEYYHFIGWIAGWMYLDYTSWETFDFIEVYQGGQRIATTLDAKTGEGYLYFYFDPKGVACDIMVRVVSKDFGNAASLASCFYSLYCPGERGAREYMHPCQSYSVYSAGHPTTEDNFALGTQTDIRAGLVVCVANSFDTKFEVFDQNMNVLDTSIVAAGKTGTLEFWKYPEHVLRSNITVRATAPIGCDWSYYVYCPIQPPHINVSDFTVPYRCVTIEGGNAQPPEADPFPWYCYEIEHTGGRGFGNFWSQVRAADGDYGVLWGGSRGWIKWNNFFTRRIKQITVAIRYSGKQGSWHSGISWYERSDPNGSAFHPLNTTAMQSYTINVNVPAGEEIWLYLYSSSDRGDGVELDYIAITNVVFA
Physico‐chemical
properties
protein length:673 AA
molecular weight: 74493,36090 Da
isoelectric point:5,49010
aromaticity:0,13819
hydropathy:-0,29108

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_010302562.1
1 673
Domain Start End Length (AA) Confidence
N-terminal 1 15 15 0,1014
Central domain 16 222 208 0,9327
C-terminal 223 673 450 0,4369
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-15
Central
16-222
C-terminal
223-673

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEa_SNUABM_17
[NCBI] 		2869545 Uroviricota > Caudoviricetes > Alexandravirus >
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_010302562.1 [NCBI]
Genbank nucleotide accession
NC_061449.1 [NCBI]
CDS location
range 69652 -> 71673
strand -
CDS
ATGTCTCGTTTTCGCGTTCGTAATGCTGCGAATAACGGTTGGCATGACTGTGTGGACACGCCTATGTTCATACGCACACATCAGGGAGACTGGACGCCTTTAACTCCCGAGAAGTTCAGTGTGCGTAACCAGTGGGGCAAGCGTTGGCATCTCATTGATGACTCGTTTGACCCCACATACGATGACCCGTGTTCGAATCTCGAAACGGGCGCGTGTGGCGGCGGTCCTACGTCAACAACCAAAGGCTCAGGCAATGGCATAGGGAGTGGCGGTCGTGAGAAGTATGACATACTTACCGGCTATCCTGCGGGGTTTGACTTGCCTGATGCTGGTCGCACTGGCTTCGGTCTTGTTAACTCTTTCGCTCCTCCTACTGGTCGTTCTATCAACAGACCCGGCATCAAGGCCATCGAATCCTACGACCCTACTGGGGTTGCTTCTCGCGCAGGATTAGGCACTTACGCTAACCCCAACGTACCATATGCGTCTGTTCACGGACGTGGTGCTGTGATCACTGAAACGTACTATGCAATGCCAGCCATAGAAGGTTATGTCGAGCTGATGATTGCGTCGTATGCGCCTGGCGGTGCGAGCGTCGATGTATATCACATGGGTGCGCGTGTTGCTTCAACGTGTGGCAAGTTGACAGGGCGTTCTCGAATTAAATTCCAGTTCGACCCTGACGCTTCTGATATGCGTATCATGGTGCGTGTGCGTACAACTCAAGGGTACGGCTGGAGTCTCGAAGTATATCCGCCTCGTCTTGCTGCACCGTCTGACCGTGGTGGGTTAGCGCTCGATAGTCAGGCATCGTATGACGTTATCAACTTCCCTGACGTCATTCATCCTGACTATATCGGCAGCCCAATCTTCCCTGCACCATGTCACGCAACAGTCTGGCCTATTGCTGAACGTATTCAGAACGCTAACGCTTTCGAATACTATCACTTTATCGGTTGGATTGCAGGTTGGATGTATCTCGATTACACGTCGTGGGAAACGTTCGACTTCATTGAGGTCTACCAAGGCGGTCAACGTATTGCCACAACGCTCGACGCTAAGACAGGCGAAGGCTATCTGTATTTCTACTTTGACCCTAAAGGCGTTGCGTGTGACATTATGGTTCGTGTGGTCAGCAAAGACTTCGGCAATGCTGCATCGCTTGCGAGTTGCTTCTACAGTCTCTACTGCCCAGGTGAACGTGGTGCTCGTGAATACATGCACCCATGTCAGAGTTACAGCGTATACTCTGCCGGTCATCCAACCACAGAAGATAATTTTGCGTTAGGAACTCAGACAGATATTCGCGCGGGGCTTGTTGTCTGCGTAGCGAACTCGTTTGATACCAAGTTCGAAGTGTTTGACCAGAACATGAACGTACTCGATACCTCTATCGTTGCTGCGGGCAAGACTGGCACACTCGAATTTTGGAAATACCCTGAGCATGTGCTTCGCTCTAACATCACAGTGCGAGCGACAGCGCCTATCGGATGTGATTGGTCGTACTACGTGTACTGTCCGATTCAGCCACCACATATCAATGTGAGTGACTTCACTGTTCCATATCGTTGTGTGACAATCGAAGGCGGCAATGCGCAGCCTCCAGAAGCAGACCCGTTCCCGTGGTACTGCTACGAGATTGAACACACAGGTGGTCGTGGCTTTGGTAACTTCTGGTCGCAAGTACGCGCTGCTGATGGTGACTATGGTGTTCTCTGGGGAGGCTCCAGAGGTTGGATTAAGTGGAATAACTTCTTCACCCGTCGTATCAAGCAAATCACTGTTGCTATTCGATACTCTGGTAAACAGGGTTCGTGGCATAGTGGCATTAGTTGGTACGAACGTTCTGACCCTAACGGAAGTGCGTTCCATCCGTTGAACACTACAGCCATGCAGTCGTACACGATTAACGTCAATGTTCCTGCAGGTGAGGAAATTTGGCTATACCTCTACTCAAGTTCTGATAGAGGTGACGGTGTAGAACTGGATTACATTGCGATCACGAACGTAGTCTTTGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
774d31b186cc95404f492eb9cdb375b2a0177a18b46b3c05831d620627b5bb59
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4516
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEa_SNUABM_17 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank