Protein

Genbank accession
QDH94252.1 [GenBank]
Protein name
tail fiber protein
RBP type
TSP
Evidence RBPdetect
Probability 0,87
TF
Evidence RBPdetect2
Probability 0,96
TF
Evidence Phold
Probability 1,00
Protein sequence
MTKNVISGSKGGSSKPYTPKEMEDNLISINKIKVLLAVSDGECDPNFSLKDLYLNDVPVMNEDGSLNYQGVTAEFRPGTQDQPYIQGFTDTASEITVARDITTTTPFVIPVTNRNLSAIRIKMLMPQGVKVESNGDRVGVEVKYKVEMAVDGGSYKEVLADTFTGKTTSGYDRSRRIDLPEFNDQVLLRVSRVTPDSTTDRVVDGIRIQSYAEVIDAKFRYPLTGLVYVEFDSELFPNQIPNISIKKKWKIINVPSNYDPESRTYSGTWNGTWKKAWTNNPAFILYDLITNQRYGLDQRELGIPLDKWSIYEAAQYCDQMVPDGKGGTEPRYLCDVVIQSQIEAYQLVRDICSIFRGMTFWNGESLSIVVDRPREPSYIFTNDNVVNGDFSYTFASEKTMYTQCNVTFDDEQNMYQQDVEGVFDVEASLRFGHNPTSITAIGCTRRSEANRRGRWILKTNLRSTTVNFATGLEGMIPSIGDVIAIADNFWSSNLTLNLSGRLMEVSGLQVFVPFKVDARAGDFIVVNKPDGKPVKRTISRVSADGKTLELNVGFGFDVQPDTVFAIDRTDIALQQYVVTTITRGDNEEEFTYSITAVEYDPNKYDEIDYGVNIDDRPTSIVQPDVMAAPENVVVSSYSRIVQGLSVETMHISWDKVPYASLYEVQWRKDNGNWHNVPQTANKETEVEGIYAGVYHVRVRSVSAAGSASPWSAIVTASLTGKVGEPGKPINLTASDNEVFGIRIKWGMPEGATDTAYVELQQAPNAGDLPAEDQASLLSLIPYPQHEYWHSILPAGFINWYRVRSVDKIGNVSGWTDFVRGMASTELDDILGDILDDIWNSPGGEAIKESAIDNANKIKDQAQSIIHNALANDADIKWTRKENGKRKAEYGHALELIANETEARVTAIEELKASIGDDIQGQITTIKEAVANEEEARVKAVQNLDAKFTKEVEGVRTETAASIGRVDQAITNEAEARAQAVSSLDSKFTGQINGVKQDLTSNISRVDQAIANEASARASADTALSTRVGNAESAISQKLDSWITASGAGAQYALKLGLTYQGKQYDAGMVLSLTGSGSAVKSQVLFDAARFGILTKVGGAYSLPFVVENNQVFINSLLVKNGSITNAMIGNEIKSNNYVAGQTGWRLDKNGNLEINGKTGTGRLTINNNLIQIYDANNRLRVRMGLW
Physico‐chemical
properties
protein length:1186 AA
molecular weight: 130839,05080 Da
isoelectric point:4,95672
aromaticity:0,08432
hydropathy:-0,33887

Domains

Domains [InterPro]
IPR053171
3–882
IPR053171 IPR015406
IPR055385
92–217
IPR055385 IPR032876 IPR036116
IPR013783
627–720
IPR013783
IPR003961
628–722
IPR003961
IPR003961
628–716
IPR003961
QDH94252.1
1 1186
Legend: Pfam SMART CDD TIGRFAM HAMAP SUPFAM PRINTS Gene3D PANTHER Other

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoS_PHB17
[NCBI] 		2591407 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QDH94252.1 [NCBI]
Genbank nucleotide accession
MN090155.1 [NCBI]
CDS location
range 25055 -> 28615
strand +
CDS
ATGACAAAAAATGTGATAAGCGGCAGTAAGGGCGGCTCCTCAAAACCTTACACACCAAAGGAAATGGAAGATAACCTAATCTCCATTAACAAAATCAAAGTTTTGTTGGCTGTTTCAGATGGTGAGTGCGATCCTAATTTCTCACTGAAAGATCTGTATTTGAATGATGTTCCGGTGATGAATGAGGATGGTTCATTGAACTATCAAGGCGTGACCGCAGAGTTTCGACCAGGCACGCAAGATCAGCCATATATCCAGGGTTTCACAGACACAGCAAGCGAAATAACCGTTGCGCGTGACATTACCACTACAACGCCTTTTGTAATTCCAGTTACAAACCGCAACCTTTCTGCAATCAGAATTAAAATGCTGATGCCGCAGGGCGTTAAGGTTGAGAGTAACGGCGACCGCGTAGGCGTTGAAGTAAAATACAAAGTTGAAATGGCTGTTGATGGCGGAAGCTATAAAGAAGTTTTAGCCGACACATTCACAGGCAAAACAACAAGCGGATATGATCGCAGTCGTCGAATTGACTTACCAGAATTCAACGATCAAGTTTTGTTGCGCGTTAGTCGTGTAACGCCTGACAGCACAACTGATCGCGTTGTTGATGGAATCAGGATTCAGAGCTATGCGGAAGTAATCGACGCGAAGTTTCGTTATCCGCTGACTGGTTTAGTTTACGTTGAATTTGATTCCGAGCTATTCCCGAATCAGATCCCTAACATTTCTATCAAGAAGAAATGGAAGATAATCAACGTTCCGAGCAACTACGATCCAGAATCGCGCACGTATAGCGGCACATGGAATGGCACATGGAAAAAGGCATGGACAAACAACCCTGCTTTCATTCTGTATGATTTGATCACCAATCAGCGCTATGGACTAGATCAAAGGGAGTTGGGAATTCCACTGGACAAGTGGAGCATTTACGAGGCCGCGCAGTATTGCGATCAGATGGTTCCAGATGGAAAGGGCGGAACGGAACCGCGCTACCTTTGCGACGTTGTTATTCAGAGCCAGATTGAAGCCTATCAGCTTGTTCGCGACATTTGCTCTATATTCCGTGGCATGACGTTTTGGAACGGCGAAAGCCTTTCGATTGTGGTTGATAGACCGCGCGAGCCGTCTTACATCTTCACAAACGACAACGTTGTTAATGGTGATTTTAGCTACACTTTCGCCAGCGAAAAGACGATGTACACGCAATGCAACGTGACATTCGACGATGAGCAAAACATGTACCAACAGGACGTTGAGGGCGTTTTTGATGTAGAGGCTTCATTACGTTTCGGGCATAACCCAACGAGCATTACAGCCATTGGATGCACTCGACGCAGCGAGGCAAACCGCCGTGGGCGCTGGATTCTGAAAACCAACTTGCGCAGCACAACGGTTAACTTTGCAACTGGTCTGGAGGGCATGATCCCATCTATCGGGGATGTGATCGCGATTGCGGATAACTTCTGGAGCAGCAACTTAACGCTGAATTTATCAGGTCGTTTAATGGAGGTTTCCGGTTTACAGGTTTTCGTTCCGTTTAAGGTTGATGCACGCGCTGGTGATTTCATCGTGGTTAACAAGCCAGATGGCAAGCCAGTAAAGCGCACCATATCAAGGGTTAGTGCAGACGGTAAAACGTTAGAGTTAAACGTTGGGTTTGGTTTTGACGTTCAGCCTGACACCGTGTTTGCTATCGACCGCACTGATATTGCATTGCAACAGTATGTTGTAACAACCATCACCAGGGGCGATAACGAGGAGGAATTCACCTACTCTATAACGGCTGTTGAATACGATCCGAACAAGTACGATGAAATTGATTATGGCGTGAACATTGACGACCGCCCAACAAGCATTGTGCAACCTGACGTTATGGCAGCACCGGAAAACGTTGTTGTGTCGTCATACTCGCGAATCGTGCAGGGCTTGAGCGTTGAAACGATGCACATTAGTTGGGATAAAGTGCCTTACGCATCGCTGTATGAGGTGCAATGGCGCAAGGATAATGGCAACTGGCATAACGTACCGCAGACAGCCAACAAGGAAACAGAGGTTGAAGGTATTTATGCGGGGGTTTATCACGTTCGCGTGCGTTCAGTTTCGGCGGCTGGTTCGGCTTCTCCCTGGTCTGCGATTGTCACCGCTTCTCTGACTGGTAAAGTTGGCGAGCCTGGCAAACCGATAAACCTTACGGCGTCAGATAATGAGGTTTTCGGAATTCGTATTAAATGGGGTATGCCAGAAGGTGCAACCGATACGGCTTACGTTGAATTGCAGCAAGCGCCTAATGCTGGTGATTTACCAGCAGAAGATCAAGCGTCGCTGTTGTCTTTGATTCCGTACCCACAGCACGAATATTGGCACAGCATTTTGCCAGCAGGTTTTATCAACTGGTATCGTGTGCGATCTGTTGACAAAATCGGCAACGTTTCCGGCTGGACTGACTTTGTGCGCGGAATGGCTTCAACTGAGCTTGATGATATTTTAGGCGATATTTTAGACGATATCTGGAATTCACCAGGCGGCGAGGCAATCAAGGAAAGCGCGATTGATAACGCGAACAAGATCAAGGATCAGGCGCAAAGCATCATTCATAACGCGCTCGCAAATGATGCGGATATTAAATGGACGCGCAAAGAGAACGGCAAGCGTAAAGCGGAATATGGTCACGCACTGGAGTTAATCGCCAATGAAACAGAGGCGCGAGTAACAGCCATTGAGGAACTAAAGGCAAGCATTGGTGACGATATTCAAGGACAGATCACAACCATCAAGGAAGCGGTTGCAAATGAGGAGGAGGCGCGAGTAAAAGCAGTTCAAAACCTTGATGCGAAATTTACGAAAGAGGTTGAAGGTGTTAGGACTGAAACCGCCGCCAGTATCGGCAGGGTTGACCAGGCGATCACGAATGAAGCAGAGGCAAGGGCGCAAGCCGTTAGCTCACTTGATTCTAAATTCACTGGACAAATCAACGGCGTTAAGCAAGATTTGACGTCTAACATTAGCCGAGTGGATCAGGCAATTGCGAATGAGGCTAGCGCGAGGGCTTCCGCTGACACGGCGTTAAGCACGCGAGTTGGCAACGCAGAAAGCGCGATTTCACAAAAACTTGATTCATGGATCACTGCGAGCGGAGCGGGTGCGCAATATGCGTTGAAATTGGGATTGACTTACCAGGGCAAACAGTACGATGCGGGAATGGTGCTATCACTGACCGGAAGCGGGAGCGCTGTAAAATCACAAGTGCTTTTCGATGCGGCGCGGTTCGGCATTCTAACCAAAGTCGGCGGGGCTTACTCATTGCCTTTCGTGGTTGAAAACAACCAAGTATTCATTAACAGTTTGTTGGTGAAAAACGGCTCAATCACTAACGCTATGATTGGTAACGAGATCAAATCAAACAACTATGTTGCAGGGCAAACCGGATGGAGGCTGGATAAAAACGGCAACCTGGAAATCAACGGCAAGACCGGAACCGGACGCTTGACCATCAACAACAACCTGATCCAGATTTATGACGCAAACAACAGATTGCGCGTAAGAATGGGATTGTGGTAA

Gene Ontology

No Gene Ontology terms available.

Enzymatic activity

No enzymatic activity data available.

Tertiary structure

PDB ID
ef0d0e2e9f89e98bcbe3e7ac64ce0ef66f17d3211a90f0c2826c131a6b5242a0
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7646
Evidence 0,7646
Download PDB

Literature

Title Authors Date PMID Source
Complete genome sequence of the virus isoalte vB_EcoS_PHB17 infecting Shiga toxin-producing Escherichia Chen,Y., Qian,P., Song,J. and Li,X. 2019-09-17 — GenBank