Protein

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Genbank accession
QQO38509.1 [GenBank]
Protein name
tail fibers protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,64
Protein sequence
MAYTLLKECTVVLVYKGVGYHFDALTQLDFSQTFNKTSGSRKTLHSRRAKPYTFANSKNSATFSLSILGTQSFAEGVLFELAGLTKIHNSVYSYEDNLNISPEICDIFLVTTEGVYKIKTAALESLSISLSLSEALTFETSFTASSIDKVPSIDLSAGMVEQGTPLKPTPIQYKLDNEIRNSIINAGISIQQTISWREDRSLHDAGSLYTPKHPVLTDRSFGINTNVYLNTIYPTPDKSHYSNLELYKSGLLCSMKDALVTHRVAPADVFTEAHDIRVTDQTNKIIVEYGGYLV
Physico‐chemical
properties
protein length:294 AA
molecular weight: 32577,50620 Da
isoelectric point:6,06508
aromaticity:0,09524
hydropathy:-0,12415

Domains

Domains [InterPro]
IPR056389
ATT
1–292
IPR056389
QQO38509.1
1 294
Architecture
ATT
ATT 1-292 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPG01
[NCBI] 		2798882 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QQO38509.1 [NCBI]
Genbank nucleotide accession
MW398869.1 [NCBI]
CDS location
range 104190 -> 105074
strand -
CDS
ATGGCATACACTCTACTAAAAGAGTGCACCGTTGTTTTAGTTTACAAAGGGGTAGGGTATCATTTCGATGCCCTAACCCAACTTGATTTTAGTCAGACATTTAATAAAACTTCTGGTTCAAGAAAAACATTGCACTCAAGACGAGCAAAACCTTATACTTTTGCTAATTCTAAAAACTCGGCTACGTTCAGTTTAAGCATTTTAGGCACTCAAAGCTTTGCAGAAGGTGTTTTGTTTGAACTAGCAGGATTAACAAAAATACATAATAGCGTGTATAGTTATGAGGATAATTTAAATATATCTCCAGAGATATGTGATATATTCTTAGTTACTACTGAAGGGGTATACAAAATAAAAACAGCAGCACTAGAGTCTTTGAGTATATCACTGTCGTTAAGTGAAGCACTTACTTTCGAAACTTCATTCACTGCTAGCTCTATAGATAAGGTTCCTAGTATTGATTTAAGTGCAGGAATGGTAGAGCAAGGTACGCCCCTAAAACCTACACCTATACAATATAAATTAGATAATGAGATAAGAAATTCTATTATAAATGCAGGAATCTCGATACAACAAACTATAAGTTGGAGAGAAGACAGATCACTTCATGATGCGGGTAGTTTATACACCCCTAAACACCCTGTACTAACAGACAGAAGTTTTGGTATTAATACTAACGTATACTTAAATACCATATACCCAACTCCTGACAAATCTCACTATTCTAATTTAGAGTTATATAAATCAGGTTTACTATGCTCTATGAAGGATGCATTAGTAACCCATAGAGTTGCCCCTGCTGACGTTTTTACTGAAGCACATGATATAAGGGTAACAGATCAAACAAATAAAATAATTGTGGAATATGGAGGATATTTAGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
26d94c73b663e678f214814908e51e884b1277fd790818de76c9700ca3b407fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8230
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome Sequence of Vibrio parahaemolyticus Bacteriophage VPG01 Kim,B.S. and Kim,M. 2012-06-15 — GenBank