Protein

View in Explore
Genbank accession
QSL67931.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MLGIFTSLLSSRSFSIVDQNTNQLVAADLRISRVNTRFSSVGQRHMLEDGTTKMDSRTVHPMEIIVEVFCPSIDVVDQINQLLLDRDTLYKVITRGMVFERMMCTSEALNQTPEMISATPVRLTFSQVLVQNPKPIMFRNAGDSSIIDRGLALAEDVVGSASDLFDYAVNGVQNAADLF
Physico‐chemical
properties
protein length:179 AA
molecular weight: 19864,55520 Da
isoelectric point:4,82520
aromaticity:0,06145
hydropathy:0,08547

Domains

Domains [InterPro]
DC_0601
STR
1–178
DC_0601
IPR054442
ATT
4–165
IPR054442
QSL67931.1
1 179
Architecture
ATT
STR
ATT 1-165 | STR 166-178 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage zikora
[NCBI] 		2810704 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus PB1 >
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QSL67931.1 [NCBI]
Genbank nucleotide accession
MW557846.1 [NCBI]
CDS location
range 26574 -> 27113
strand +
CDS
ATGTTAGGGATTTTCACCAGCCTCCTAAGCTCGCGGTCTTTTTCGATTGTCGATCAGAATACAAACCAGCTAGTTGCTGCGGATTTGAGGATAAGCCGGGTTAACACCCGGTTTTCTTCTGTAGGGCAGCGCCACATGCTGGAAGACGGTACGACAAAGATGGACTCCAGAACGGTCCACCCTATGGAGATCATCGTTGAGGTATTCTGCCCTTCAATTGATGTCGTCGATCAGATTAATCAACTGCTCCTGGATCGCGATACGCTGTACAAAGTCATCACTCGCGGCATGGTATTCGAACGAATGATGTGTACCAGCGAAGCGCTCAATCAGACGCCAGAAATGATATCGGCAACTCCTGTGCGACTGACATTTTCCCAGGTGCTCGTTCAGAATCCCAAACCCATCATGTTCAGGAATGCTGGAGACTCTTCCATAATCGACCGAGGGTTGGCCCTGGCCGAAGACGTTGTGGGCTCGGCCAGTGATCTGTTCGACTACGCAGTGAACGGCGTCCAGAACGCCGCAGACTTGTTCTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
37ef31aa80f5d1d59c3171753042fa7ba5cb08d7f316e728bfb110570a89961c
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,7068
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete Genome annotation of a Temperate Myoviridae Pseudomonas phage Zikora isolated from Hospital sewage in Jos, Plateau State, Nigeria Nnadi,N.E., Ezemokwe,G.C., Aguiyi,J.C., Agwom,F., Ngene,A., Gimba,N., Morenikeji,T.R., Okonkwo,O., Okoliegbe,I. and Resch,G. 2021-07-29 — GenBank