Protein

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Genbank accession
YP_012026710.1 [GenBank]
Protein name
tail fiber
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MIDYNGLKTIFGEKLPESHIFFATVAAHKYVPSYAFLRRELGLSSAHTNRKVWKKFVEAYGKAVPPAPPLTLSKDLTASMSVEEGAALTLSVTAAGGTGPYTYAWTKDGSPIPDASGATYTKPTAAAEDAGSYKVTVTDSKQVSKDSTACAVTVNPTVPGG
Physico‐chemical
properties
protein length:161 AA
molecular weight: 16905,91120 Da
isoelectric point:8,57470
aromaticity:0,09317
hydropathy:-0,16584

Domains

Domains [InterPro]
IPR048804
ATT
2–60
IPR048804 IPR007110
DC_0400
STR
2–159
DC_0400
IPR013783
STR
76–154
IPR013783
IPR036179
RBD
76–151
IPR036179
PF13927
STR
79–138
PF13927
YP_012026710.1
1 161
Architecture
ATT
STR
ATT 2-60 | STR 61-159 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EC100
[NCBI] 		2894397 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_012026710.1 [NCBI]
Genbank nucleotide accession
NC_105587.1 [NCBI]
CDS location
range 100747 -> 101232
strand -
CDS
ATGATTGATTATAATGGTCTAAAGACCATTTTTGGTGAAAAACTGCCAGAATCTCATATCTTCTTTGCTACGGTTGCTGCGCATAAATATGTTCCTAGCTATGCTTTTCTGCGTAGAGAACTAGGGCTTTCATCTGCGCATACTAACCGTAAAGTATGGAAGAAATTTGTAGAGGCTTATGGTAAAGCAGTTCCTCCTGCTCCACCATTAACTCTTTCTAAAGATTTAACTGCTAGCATGTCCGTTGAAGAGGGAGCAGCATTAACACTTTCTGTTACTGCAGCTGGTGGTACTGGTCCATATACTTATGCATGGACTAAAGATGGTTCTCCGATTCCGGATGCTTCAGGAGCTACCTATACTAAGCCTACAGCAGCAGCTGAGGATGCCGGCTCTTATAAAGTAACTGTAACAGATAGTAAGCAAGTAAGTAAGGATTCTACTGCATGTGCTGTAACAGTTAATCCTACTGTTCCTGGAGGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0835e44aee4a9166632091b43ef6f925b8d1adb8b53cedaacc0940f29fcb7b38
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7457
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of 17 Escherichia coli bacteriophages isolated from wastewater, pond water, cow manure and bird feces Vitt,A.R., Ahern,S.J., Gambino,M., Holst Sorensen,M.C. and Brondsted,L. 2022-10-20 — GenBank