Protein

View in Explore
Genbank accession
QYC51430.1 [GenBank]
Protein name
central tail fiber J
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,82
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MTNIKARKGGSSKTRTPVEMPDNLISKDKIKLLLAVSDGEVVDDFSLKQLHFGGVPVQNEDGSYNYEGVIAEFRPGTQTQSYIQGFSESSAEFQVARDVTFNTPYTLTVSNKNLSAIRFRLLWPRVLTQKDNGDMVGSVVEYKIEMAVDGASYQTYLTDKIDGKNTTGGYDRSIRVNLPQDFTSQVLIRVSRITPDADGVKVVDAFQVQSYAEVIDAKFRYPLTAMLYVEFDSDLFQNQIPTISLKKKWKIVQVPRNYDPVNRTYAGTWDGTFKWAWSNNPAWVLYDLIMNQRYGLDQRELGIPVDKWSLYEVAQYCDELVPDNRGGMEPRYLMDVVVQSQVEAFQLVRDVCSAFRGMTFYNGESLSIIVDKPRDPVYLFTADNVVDGVFVRTFPSEKTMYTSCNVMFDDEENQYEQDVEPVFNPDAAMRFGHNPTIITAIGCTRRTEANRRGRWILQTNLSATTVSFSTGLEGMIPSCGDVIYVADPHWQSAFNLVLSGRIMEVTGTQVFLAFRCDAKAGDTLILNTDDGKPLRRTIASVSADGKTLTLNVGYNFDVAPDSVFLIESDQLAAEQYVVTRIEKGSDDDEFTFAITATQYNPNKYDAIDNGVITDDRPTSVVDPDSMGAPENVSISSFSRIVQGMSVETMVIGWSAVQYAKLYEVQWRKDGGNWNNVPRTATTQVDIEGIYAGEYQARVRCISGGNIASPWSALATATLTGKVGAPKGPINLFASDDEIFGIRVKWAMPEGAEDTAYIELYQSQSGTDQDASLLTLIPYPASEYWHSILPAGYVNFYKARSVDRIGNVSAWTDYARGMSSTDVNAITDVILDEILDSDAMKELQESAQDSAAKLNEYANSIIQNALANDGDVRIMRKENGKRKAEIKHAEVLIANETEARVQQVNQISAEFNENLNAGLTQVNEALANETEARVTSEEALSARIGENSSALDQKLESWAEVNGVGSMYTMKLGLKYNGQEYNSGMALQLTAQGNNVVSQVLFIADRFAIIRNAESGAYTLPFVVQNDQVFMNNALIQDGSITNAKIGNVIQSNNYIAGQQGWMINKNGGSEFQNTTVRGTIYATDGVFKGTVQAESFIGDIAVAKRYDGMTLRRNQTVQRDGYYQNRGYGMTVVLACTLVCETYGSGSSQLGYTVDVTFNIGGQQVVRRIYVDAGNIVQGTTAVELRFAADLAADNNNVSFFIKAAGRDAVTDYTVTVDNITATAFRTNSNSFS
Physico‐chemical
properties
protein length:1233 AA
molecular weight: 136344,88800 Da
isoelectric point:4,71465
aromaticity:0,09651
hydropathy:-0,27908

Domains

Domains [InterPro]
DC_0014
STR
1–1232
DC_0014
IPR053171
Unmapped
3–876
IPR053171 Coil IPR015406
IPR055385
ATT
90–217
IPR055385 IPR032876 IPR013783 Coil
IPR036116
STR
627–716
IPR036116
IPR003961
STR
628–722
IPR003961
QYC51430.1
1 1233
Architecture
STR
ATT
STR
ATT
STR
STR 1-89 | ATT 90-217 | STR 218-340 | ATT 341-489 | STR 490-1232 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QYC51430.1
1 1233
Domain Start End Length (AA) Confidence
N-terminal 1 500 500 0,8674
Central domain 501 1052 553 0,0656
C-terminal 1053 1233 180 0,7011
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-500
Central
501-1052
C-terminal
1053-1233

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage P1
[NCBI] 		2862735 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QYC51430.1 [NCBI]
Genbank nucleotide accession
MZ598515.1 [NCBI]
CDS location
range 16149 -> 19850
strand +
CDS
ATGACTAATATCAAGGCCCGCAAGGGCGGTTCCAGCAAGACGCGAACCCCGGTAGAAATGCCTGATAACCTGATCTCGAAAGACAAGATTAAGTTATTGCTGGCCGTTTCTGACGGTGAAGTAGTGGATGACTTCAGCCTGAAGCAGTTGCATTTCGGAGGCGTTCCGGTTCAGAACGAAGACGGGAGTTATAACTATGAGGGCGTTATTGCAGAATTTCGCCCCGGCACGCAAACGCAGAGTTACATCCAGGGCTTCAGTGAATCAAGCGCCGAATTCCAGGTTGCACGCGACGTTACCTTTAACACGCCGTACACGCTGACGGTATCGAACAAGAATCTTTCTGCTATCCGCTTCCGCCTGTTATGGCCCCGCGTGCTGACGCAAAAAGATAATGGCGATATGGTCGGCTCGGTCGTTGAGTACAAGATCGAAATGGCGGTTGACGGTGCGAGCTATCAAACCTACCTGACCGACAAAATCGACGGGAAGAATACGACTGGCGGTTACGATCGCAGCATCCGCGTCAACCTACCGCAAGACTTCACGTCGCAGGTGCTTATCCGCGTAAGCCGAATTACGCCGGACGCTGACGGGGTGAAGGTAGTCGATGCCTTCCAGGTTCAGTCCTACGCTGAGGTGATTGATGCAAAATTCCGCTACCCGTTGACGGCAATGCTTTACGTCGAGTTTGATAGCGATCTGTTCCAGAACCAGATTCCGACAATCTCGCTCAAGAAGAAGTGGAAGATTGTCCAGGTTCCGCGCAACTACGACCCTGTTAACAGGACATACGCCGGGACGTGGGACGGAACTTTCAAATGGGCGTGGAGCAACAACCCTGCTTGGGTTCTTTACGACCTGATCATGAATCAGCGTTATGGGTTAGACCAGCGCGAGTTAGGGATCCCGGTCGACAAGTGGTCGCTCTATGAGGTGGCGCAATATTGTGATGAGCTTGTGCCGGATAATCGCGGCGGGATGGAACCGCGTTACCTGATGGATGTGGTTGTGCAGTCTCAGGTTGAGGCCTTCCAGTTGGTAAGGGATGTTTGTTCAGCCTTCCGTGGAATGACGTTCTACAACGGGGAAAGCCTTTCGATTATCGTCGACAAGCCACGCGATCCGGTTTACCTGTTCACTGCTGATAACGTCGTTGACGGTGTATTCGTGCGAACATTTCCGAGCGAAAAAACGATGTACACATCGTGCAACGTGATGTTCGACGACGAAGAAAACCAGTACGAGCAGGACGTTGAACCAGTGTTTAACCCTGACGCTGCCATGCGGTTCGGTCACAACCCGACAATCATCACAGCGATCGGTTGCACCAGACGGACAGAAGCTAACCGCCGCGGGCGCTGGATTCTGCAAACGAACCTAAGCGCAACCACCGTTTCGTTTTCTACTGGCCTGGAAGGTATGATCCCTTCGTGCGGCGATGTGATTTACGTTGCAGATCCGCATTGGCAATCGGCCTTTAACCTGGTTTTGTCAGGTCGCATTATGGAAGTAACGGGAACGCAGGTTTTCTTGGCTTTCCGCTGCGACGCGAAGGCGGGCGATACGCTGATTCTGAACACTGACGACGGTAAGCCATTACGTCGAACCATTGCCAGCGTATCAGCAGACGGAAAAACACTGACGCTAAACGTGGGATATAACTTCGACGTTGCGCCGGACAGCGTATTCCTGATCGAAAGTGACCAACTGGCGGCTGAACAGTACGTTGTTACCAGGATTGAGAAGGGGAGCGATGACGACGAATTTACTTTCGCAATCACAGCCACCCAATACAACCCGAACAAGTACGACGCGATCGACAACGGCGTAATCACTGACGACCGCCCAACGTCGGTTGTTGACCCGGATTCAATGGGAGCGCCGGAAAACGTGTCGATTAGTTCATTCTCACGCATTGTGCAGGGGATGAGCGTCGAGACGATGGTAATCGGCTGGTCTGCCGTGCAGTACGCAAAACTTTACGAGGTGCAATGGCGTAAGGATGGCGGCAACTGGAACAACGTGCCGCGCACAGCGACAACGCAGGTTGATATTGAGGGGATTTATGCTGGCGAATACCAGGCGCGCGTAAGGTGCATTAGCGGCGGCAATATCGCGTCTCCGTGGTCTGCTTTGGCAACCGCCACACTGACCGGGAAAGTAGGGGCGCCAAAAGGCCCGATTAACCTTTTTGCGTCGGACGATGAGATCTTTGGCATTCGCGTTAAGTGGGCCATGCCGGAAGGTGCGGAAGACACGGCATACATTGAGCTTTACCAGTCGCAAAGCGGAACCGATCAGGATGCAAGCCTGCTTACCCTGATTCCTTACCCGGCTTCTGAATACTGGCATTCAATTCTGCCCGCTGGCTACGTGAACTTCTACAAAGCAAGAAGCGTAGACCGTATCGGCAACGTTTCAGCATGGACTGATTACGCTCGCGGCATGTCGTCTACTGACGTTAACGCCATCACGGATGTGATCCTTGATGAGATCCTCGACAGCGACGCGATGAAAGAACTTCAGGAGAGTGCGCAGGATAGCGCGGCAAAACTCAATGAATACGCGAACAGTATCATTCAAAACGCATTGGCGAATGATGGCGATGTTAGAATAATGAGAAAGGAGAATGGCAAGAGGAAAGCTGAAATTAAACACGCAGAAGTTCTCATAGCAAATGAGACGGAAGCAAGGGTGCAGCAGGTTAACCAGATCTCGGCAGAGTTCAACGAAAACCTCAATGCTGGATTAACTCAAGTTAACGAGGCACTAGCCAATGAAACTGAGGCTCGGGTTACGTCGGAAGAGGCGCTTTCAGCAAGGATCGGAGAGAACTCCTCGGCGCTAGATCAGAAACTCGAATCGTGGGCTGAAGTTAATGGCGTCGGTTCCATGTACACGATGAAGTTGGGATTGAAGTACAACGGCCAGGAATACAATTCCGGGATGGCCCTACAGCTTACCGCGCAAGGGAACAACGTTGTTTCGCAAGTTCTGTTTATTGCTGATAGATTCGCTATCATCCGAAATGCTGAGTCTGGAGCGTACACTTTGCCGTTTGTTGTGCAGAATGACCAGGTTTTTATGAATAACGCGCTCATTCAGGACGGTTCGATTACCAATGCGAAGATCGGTAACGTCATTCAGTCCAACAACTACATCGCCGGGCAGCAAGGGTGGATGATTAACAAGAATGGAGGTTCTGAATTCCAGAACACTACTGTTCGAGGGACTATCTACGCTACCGACGGCGTATTTAAAGGCACTGTACAGGCTGAATCGTTTATAGGAGATATCGCCGTAGCCAAACGCTATGACGGAATGACCCTCCGCCGTAACCAAACAGTGCAGCGTGACGGATACTACCAAAACAGGGGGTATGGAATGACCGTAGTGCTTGCTTGTACGTTGGTATGTGAGACTTACGGCAGCGGAAGTTCACAGCTTGGTTATACCGTTGACGTTACGTTTAACATCGGTGGTCAGCAGGTTGTGCGCCGCATTTATGTTGATGCTGGTAACATTGTTCAGGGTACAACTGCGGTTGAGCTTCGCTTCGCTGCCGACCTTGCTGCTGATAACAACAATGTTAGCTTCTTCATCAAGGCCGCCGGGCGCGACGCAGTAACCGACTATACCGTGACGGTTGACAACATAACGGCCACCGCGTTCCGCACAAACAGTAACTCATTCAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9261a705bab6d9e5bd2dab90b4265c2aafe1498426b0550dd9e984f08cf69250
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2794
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, identification and complete genomic analysis of a novel virulent bacteriophage that infects Klebsiella pneumoniae ATCC700603 Liu,L., Liu,C., Jia,M., Wan,L. and Wu,X. 2023-10-19 — GenBank