Protein

View in Explore
Genbank accession
QBX27340.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
Protein sequence
MTFPENTLQLNQEKGGNRLKQGDFGSKLTFTLKDAQGNYFHELNSKTATITLCDDNHIVYESTTLVSDSSVTFNIEKAVQTGVFYLEIKIDNYIFPSDRSCLISIKAGAVAYDLKDLIPNYDVNMTIDGILSDLNRQGGSITDLLNKMASIYSNALADHAEIIQARGTHNTLNDRLINFADAITTNEKDILTKIDNKNNVIKLSHLSQEVKEALTGGSVAVVGKDGVSGIDNIIDGTVTPDNLIDHPLFIEKGVNLFNKATANYGFFVAYQDGKIYSTELDFYVSDFIKIEPNTSYAKNDGSGQQLAFYDSSKVFISGLSIGTTFTSPSNAAYIRLTVKSNYINTMMLVKGSVVGGYEPYTIKVKRAAIEEIKPLELEENSLLLTDTSKNLFDVEKALTGFYINYPDGKLYTQSLFSASDYIKVLPDTDYVKSDNQQLAFYDSNKAYISGLASATTFKTPTNAQYVRLSIPNTKVSNYQLEKGTIATAYEPFGALKIRRSDLAQLKTLSSANKPELLLPSKINIYKGMQFDIFFDGAIKNYQEFRHGNYYIAGQTIVNGVVSALKGNIISGKWFYRPTTNESFTIRFAIINTYTGDIVDSKDVAFTVTDKPVSGSPTIVTIGDSFMDLYGITKRISDLTDASGMTAKFIGLHDTGKTGVKDDTWAGWSWKSYATAPFDYKRTDRDDSGSTSTVNQFYNPSSKYFDFSYYMSTYQSNQNVDIVIINLGLNDVQQKTVDAVKTELAQSKKYVTDIINSIHAYDPNIKILLGTVPKQTSDNTFLGSYSTTYNHSERLNHNVEIFNEMLLEFESTSNVFISPLNLNFNSSESYLTKNIIVDQISEASVPMASDLHPNITGTEYIARTVYQAINTALT
Physico‐chemical
properties
protein length:873 AA
molecular weight: 96877,56530 Da
isoelectric point:5,22694
aromaticity:0,10767
hydropathy:-0,25452

Domains

Domains [InterPro]
DC_1068
STR
29–385
DC_1068 DC_1068
IPR036514
STR
602–871
IPR036514
SSF52266
STR
614–869
SSF52266
IPR001087
ENZ
618–862
IPR001087
cd00229
ENZ
618–867
cd00229
QBX27340.1
1 873
Architecture
STR
STR 29-871 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Streptococcus phage Javan384
[NCBI] 		2548140 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Streptococcus parauberis KCTC_11537
[NCBI] 		936154 Bacillota > Bacilli > Lactobacillales > Streptococcaceae > Streptococcus > Streptococcus parauberis

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBX27340.1 [NCBI]
Genbank nucleotide accession
MK448924.1 [NCBI]
CDS location
range 32854 -> 35475
strand +
CDS
ATGACATTTCCAGAAAATACATTACAATTAAATCAAGAAAAGGGCGGAAATAGACTTAAACAAGGAGATTTCGGCTCTAAATTAACATTCACACTTAAAGATGCTCAAGGAAATTATTTCCACGAGTTAAATAGTAAGACTGCAACAATTACACTTTGCGACGATAACCATATCGTTTATGAATCAACAACTTTAGTATCAGATTCATCAGTAACATTCAATATTGAAAAAGCAGTACAAACTGGAGTTTTCTATCTTGAAATTAAAATCGACAATTATATCTTCCCATCTGATAGAAGCTGTTTAATTTCTATTAAAGCTGGGGCAGTTGCTTACGACCTTAAAGACTTAATTCCAAATTATGACGTCAATATGACAATAGACGGCATTCTAAGTGATTTAAATAGACAAGGTGGAAGTATAACTGATTTGCTAAACAAAATGGCTTCTATCTACTCAAATGCATTGGCTGACCATGCAGAAATCATCCAAGCAAGAGGCACACATAATACATTAAATGATAGACTTATTAATTTTGCTGACGCAATTACAACTAACGAAAAAGATATTTTAACAAAGATTGATAATAAAAACAATGTTATCAAACTAAGTCATCTGTCTCAAGAAGTTAAAGAAGCTTTAACAGGAGGCTCTGTTGCTGTTGTCGGAAAAGATGGCGTAAGTGGTATTGATAATATCATTGATGGAACGGTCACACCAGACAATTTAATTGATCATCCTTTATTCATAGAAAAAGGCGTTAATCTATTTAATAAAGCAACCGCAAATTATGGTTTTTTTGTTGCATATCAGGACGGTAAAATATATTCGACCGAATTAGACTTTTACGTTTCCGATTTTATTAAAATTGAACCTAATACATCTTACGCAAAAAATGATGGTTCAGGACAACAATTAGCATTTTATGATAGTTCGAAAGTATTTATCTCTGGGTTGTCAATAGGAACTACTTTTACATCTCCGTCTAATGCAGCATATATTAGATTGACTGTAAAAAGCAATTATATAAATACAATGATGTTAGTAAAAGGCAGCGTTGTTGGTGGTTATGAACCTTACACTATTAAAGTTAAACGTGCAGCGATTGAAGAAATTAAACCTTTAGAATTGGAAGAAAATTCTTTGTTATTAACAGATACATCTAAAAACTTATTTGATGTTGAAAAAGCTCTTACTGGATTTTATATAAATTATCCAGATGGTAAGCTATATACTCAAAGTCTGTTTAGCGCTAGCGATTATATTAAAGTTTTGCCAGACACAGATTATGTTAAAAGCGATAATCAGCAGTTAGCGTTTTATGACTCTAACAAAGCATACATATCAGGTTTAGCAAGCGCAACCACTTTTAAAACCCCTACAAATGCACAATATGTAAGATTATCAATACCAAACACAAAAGTATCTAACTACCAACTCGAAAAAGGGACGATTGCTACAGCTTATGAACCTTTTGGAGCGTTAAAAATCCGTAGAAGTGATTTAGCACAATTAAAAACTCTATCATCGGCAAACAAACCTGAACTGTTATTGCCATCAAAAATCAATATATACAAGGGAATGCAATTTGATATTTTCTTTGATGGTGCAATAAAAAACTATCAAGAATTTAGACACGGTAATTATTACATAGCTGGGCAAACAATTGTCAATGGGGTTGTATCTGCATTGAAAGGCAATATCATTTCAGGTAAGTGGTTTTATCGTCCTACTACGAATGAAAGTTTTACCATCCGATTTGCAATTATTAACACCTATACTGGTGATATTGTTGATAGCAAAGATGTTGCATTTACTGTAACAGACAAACCAGTTAGTGGTAGCCCTACAATCGTCACTATTGGTGATAGTTTTATGGATTTATACGGTATTACTAAGCGTATCAGTGACTTGACGGATGCATCAGGTATGACTGCTAAATTTATAGGTTTGCATGATACAGGCAAAACTGGTGTAAAAGACGACACTTGGGCTGGTTGGTCATGGAAAAGTTATGCTACTGCACCTTTTGATTACAAACGTACAGATCGTGATGACAGTGGGTCAACTTCAACTGTAAATCAGTTTTACAACCCATCGTCAAAATACTTTGATTTTAGTTACTATATGTCTACATATCAAAGCAACCAAAATGTTGATATCGTTATTATCAACTTAGGATTAAATGATGTGCAACAAAAGACAGTCGATGCTGTTAAAACCGAATTAGCACAAAGTAAAAAATACGTTACTGATATTATTAATAGCATACATGCGTACGACCCAAATATTAAAATTCTACTTGGTACTGTACCAAAACAAACGTCTGATAATACGTTCTTAGGTTCATACTCAACAACCTACAACCACTCTGAACGATTAAATCATAATGTAGAAATATTTAACGAGATGCTACTTGAATTTGAAAGTACATCAAATGTATTTATTTCACCATTAAATTTGAATTTCAATAGTTCAGAAAGTTATTTGACAAAAAATATTATTGTTGATCAAATTTCAGAGGCTTCTGTACCAATGGCATCAGACTTGCATCCTAACATTACAGGAACAGAGTATATTGCAAGAACAGTTTATCAAGCGATTAATACTGCTTTAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3f471aae48189392cd49391b3c663ba74f6efbfc67ea1e8e3cfe48900eb71e2
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7585
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Prophages and satellite prophages are widespread among Streptococcus species and may play a role in pneumococcal pathogenesis Rezaei Javan,R., Ramos-Sevillano,E., Akter,A., Brown,J. and Brueggemann,A.B. 2018-12-20 — GenBank