Protein

View in Explore
Genbank accession
ASD51111.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MALKTILNKQTDFTGEFPVEYAKSGLWRFNDASVDEYGYLADSSGLDRKIELVNYLGTTASLQSGQKGRQIRININNPATEKTYLKVANDGTFFSEMGERILVGGWMIPTTYSVGNTYCPILNTRYGPGQPIFYLSLFAGRPRIMLYNASGSLILDQTTTPPFSLINGGVYFICTVIEPKNKNAWIVLGDKTSGTSWVSPTYSFTGTLNPSCTADIIMGMHADAYWYAGRFDDWFFDMDSSLTVDDLIDYFNGSLLTNGGDMGGAVDALSVPGVVSLRETEGVYPTEGTLYTAPATCNLSGTGRVSVTSEYISGVTAVGPIETSTSDDLVHWSDWVAIALDGKLVSPNKAYIRFKVTFTTTDTSKTPRIIDIRLYDIPKSPYERIGFSRPVVLDSNGAWEAVLENAYNIVVTSEINGEDTLSFMIPYRDTKRGFIDSEKKIQIVDDIYKVRTLTDTKDSEGNLATEVYAEAEFYDLTFSERKEEHKFDAETAEVSMAYALEGTEWSVGTVNVRTKRTWTSTEKNALSILRTVADLHGGDLVFDCPNRLVHLLTVYGTDSGALFAYKKNMKSIKRVVDTRSLVTRLYAIGSDGLTFADINGGKAYVEDYTYLSDIRISTLDCSSFTNPYQMKEYTEMRLAQYAKPNISYVLNAMDLSVLTGYEHEAWSLGDYVHVEDKDLGLSVTTRVIRREYNLQEPWNTVLELSTTLKNLGSSASQWDNVADSLEGTSMVTNNDIREMVPFNLLRNSRGDDAMAYWVNSGFEVDGDNGVSGSTSFKAIGVANMKKSMAQTIYPANRSSYTLSAQIASENLEKLSSNSQVGIEVVIEYEDGTTEARFIDLY
Physico‐chemical
properties
protein length:841 AA
molecular weight: 93258,42790 Da
isoelectric point:4,72442
aromaticity:0,10702
hydropathy:-0,23650

Domains

Domains [InterPro]
DC_0984
ATT
25–387
DC_0984 IPR044051 IPR010572
DC_1956
STR
350–836
DC_1956
IPR007119
Unmapped
412–697
IPR007119
ASD51111.1
1 841
Architecture
ATT
STR
ATT 25-387 | STR 388-836 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ASD51111.1
1 841
Domain Start End Length (AA) Confidence
N-terminal 1 16 16 0,9453
Central domain 17 533 518 0,5745
C-terminal 534 841 307 0,0637
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-16
Central
17-533
C-terminal
534-841

Taxonomy

  Name Taxonomy ID Lineage
Phage Erysipelothrix phage phi1605
[NCBI] 		2006938 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erysipelothrix rhusiopathiae
[NCBI] 		1648 cellular organisms > Bacteria > Bacillati > Bacillota > Erysipelotrichia > Erysipelotrichales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ASD51111.1 [NCBI]
Genbank nucleotide accession
MF172979 [NCBI]
CDS location
range 50359 -> 52884
strand +
CDS
GTGGCACTAAAAACAATATTAAATAAACAGACAGATTTTACGGGAGAGTTCCCAGTCGAATATGCAAAATCTGGACTGTGGCGATTTAATGATGCATCAGTTGATGAATATGGCTATCTTGCAGACTCTTCTGGGTTAGACAGAAAAATAGAGCTTGTAAATTATCTAGGAACAACTGCAAGCCTTCAAAGTGGGCAAAAAGGGAGACAAATCCGAATCAACATCAACAATCCCGCTACGGAAAAGACTTATCTTAAAGTGGCTAATGATGGTACTTTCTTTTCGGAGATGGGAGAACGAATCCTTGTTGGCGGTTGGATGATACCGACTACTTATTCGGTGGGAAATACCTACTGTCCCATATTGAATACGCGCTATGGTCCTGGTCAGCCTATCTTTTACCTGTCGCTCTTTGCAGGCAGACCTAGAATCATGCTTTATAACGCTAGTGGTTCTCTCATACTCGACCAAACAACCACACCGCCTTTTTCACTCATCAATGGTGGTGTGTATTTTATTTGCACGGTCATAGAACCAAAAAATAAAAATGCATGGATTGTACTGGGAGATAAGACGAGCGGAACAAGCTGGGTGTCACCGACTTATTCCTTTACAGGCACACTAAATCCTTCTTGCACGGCCGACATCATTATGGGCATGCATGCAGATGCCTATTGGTATGCTGGAAGATTTGATGACTGGTTTTTTGATATGGATTCAAGTCTTACAGTGGATGATTTGATTGATTATTTCAATGGGTCTCTTTTGACTAACGGTGGTGATATGGGCGGTGCTGTTGATGCTCTTAGCGTACCGGGAGTGGTGAGCTTAAGGGAAACAGAAGGTGTCTATCCAACGGAAGGAACACTATATACGGCTCCGGCAACGTGCAATCTATCTGGCACAGGTCGGGTCTCCGTTACCAGTGAATATATTTCTGGGGTAACTGCAGTTGGGCCGATAGAAACCTCAACAAGCGATGACCTAGTTCATTGGAGTGATTGGGTAGCCATCGCACTTGATGGAAAACTGGTATCTCCAAATAAGGCATACATTCGTTTTAAGGTCACATTTACTACCACAGATACGAGTAAGACCCCTCGAATTATTGATATCAGGCTATATGACATTCCAAAGTCACCTTATGAGAGGATTGGTTTTTCAAGACCGGTCGTACTGGATTCAAATGGGGCTTGGGAGGCTGTGTTAGAAAATGCTTATAACATTGTGGTAACTAGTGAAATCAATGGCGAGGATACGCTCTCCTTTATGATCCCCTACCGTGATACCAAGCGGGGATTTATTGATAGCGAAAAGAAAATTCAGATTGTTGATGACATCTATAAAGTAAGGACTTTAACAGATACAAAAGACAGCGAAGGAAATCTAGCGACAGAAGTGTATGCTGAGGCAGAGTTTTATGACCTGACTTTTTCAGAGCGAAAAGAAGAGCATAAATTTGATGCAGAAACTGCTGAAGTCTCTATGGCTTATGCCTTAGAAGGAACAGAGTGGAGCGTAGGTACAGTCAATGTACGAACTAAAAGAACCTGGACAAGTACAGAAAAGAATGCACTTTCCATCCTTCGCACGGTTGCTGACTTACACGGTGGAGACCTTGTCTTTGATTGCCCAAATAGACTGGTCCATCTCTTAACGGTCTATGGTACGGATAGTGGTGCATTGTTCGCCTATAAGAAAAATATGAAGAGCATTAAAAGAGTCGTTGATACCAGAAGTCTTGTAACAAGGCTCTATGCCATTGGTAGCGATGGTCTTACCTTTGCAGACATCAATGGAGGAAAGGCATATGTGGAGGACTATACTTATTTGTCTGATATTCGAATATCAACGCTTGATTGTTCTTCCTTTACCAATCCCTATCAGATGAAAGAATATACCGAGATGAGGCTTGCTCAGTATGCAAAACCCAATATCTCCTATGTTTTAAATGCAATGGATTTATCAGTCTTAACGGGTTATGAGCATGAGGCATGGTCGCTTGGTGATTACGTTCATGTAGAAGATAAGGATTTAGGGCTGTCGGTGACCACTCGTGTCATACGAAGAGAATACAACTTACAAGAACCATGGAATACAGTATTAGAACTATCTACTACCCTTAAAAATCTGGGTAGTTCTGCAAGCCAGTGGGATAACGTGGCAGATTCTCTTGAAGGCACAAGTATGGTGACAAACAATGATATCCGGGAAATGGTGCCATTTAATTTATTGCGAAATTCTCGTGGTGATGATGCGATGGCTTATTGGGTTAACTCAGGCTTTGAAGTAGATGGTGATAACGGTGTAAGTGGGTCGACATCCTTTAAGGCGATTGGTGTAGCCAATATGAAAAAGAGTATGGCTCAGACCATCTATCCGGCTAATCGCTCTAGCTACACGCTCTCGGCACAAATCGCATCTGAAAACCTTGAAAAGCTGAGTAGCAATTCACAGGTTGGCATTGAAGTGGTTATTGAATATGAAGATGGAACGACAGAAGCAAGGTTTATTGATTTGTATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
3da0cea333c9712bcb9dac33d7164ef47ce3240d0222417f8e5484ca3c73efd1
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Erysipelothrix rhusiopathiae strain ZJ carries a novel multi-resistance gene cluster and a prophage that harbors mef(A) and msr(D) genes Li,Y. and Zhang,A. 2020-06 — GenBank