Protein

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Genbank accession
WGM49819.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFARMVKYGNIAPVPVVPTIKDFKIGFSHEVLLDSAGDVWGIGYNTDGQLGFLDANTNSLGAWSKIYTDVRLIGVTARYTVVVTNNNRILYAGNNLISSTTTLGWTDITTSMGPVAVDSIDALYCTDGMMHIKTSDGSLYAYGRNMNANSGVTGGVISVATKVNLPNAVIDMRYTFSYGSVLCRLDTTSIYAWGRNINGELGQGNTTAIVTPKLLSGASIAMGTSYNATAIVSGSALLLTCGGQNSGQLGNGITTDGNVYTFGVRTYPGDLNTIRSPVDCSTTYTSAFMSPDGIYYTGANRSMFGGISGTATVGVYTKCSDLPITYSNIILWSSGTIGGAICSSTELYQCGIGRYIAGDGATTTRYGFRKTPLPWEAY
Physico‐chemical
properties
protein length:380 AA
molecular weight: 40200,95820 Da
isoelectric point:6,70054
aromaticity:0,10000
hydropathy:0,08658

Domains

Domains [InterPro]
DC_0433
ATT
1–114
DC_0433 IPR009091
IPR009091
STR
8–165
IPR009091 IPR000408
IPR009091
STR
15–219
IPR009091
IPR051210
Unmapped
26–215
IPR051210
DC_0433
ATT
95–239
DC_0433
IPR000408
STR
192–221
IPR000408
WGM49819.1
1 380
Architecture
ATT
STR
ATT 1-239 | STR 240-378 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGM49819.1
1 380
Domain Start End Length (AA) Confidence
N-terminal 1 237 237 0,0509
Central domain 238 369 133 0,5255
C-terminal 370 380 10 0,9712
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-237
Central
238-369
C-terminal
370-380

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_Ec-M-J
[NCBI] 		3038267 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGM49819.1 [NCBI]
Genbank nucleotide accession
OQ718158 [NCBI]
CDS location
range 341205 -> 342347
strand -
CDS
ATGTTACCTTTTGCTAGAATGGTTAAGTACGGGAATATTGCACCAGTTCCGGTAGTTCCTACAATAAAAGATTTTAAGATTGGATTTTCACATGAAGTGTTATTGGACAGTGCAGGTGATGTATGGGGTATTGGATACAATACAGATGGGCAGTTGGGCTTTTTGGATGCAAACACCAATTCATTAGGTGCGTGGTCTAAGATATATACTGATGTTCGATTAATTGGTGTTACTGCCAGATATACAGTTGTAGTTACTAATAATAATAGAATACTATACGCCGGAAATAACTTAATTTCCAGTACTACCACGCTTGGGTGGACCGATATAACTACCAGTATGGGTCCGGTTGCAGTGGATAGTATAGATGCATTGTATTGTACAGATGGTATGATGCATATTAAAACTTCAGATGGTTCTTTATATGCATATGGTCGTAACATGAACGCAAACAGTGGTGTTACTGGTGGTGTTATTAGTGTTGCAACTAAGGTTAATTTGCCTAATGCGGTAATTGACATGCGATATACGTTTAGTTATGGTTCAGTACTATGTCGATTGGATACAACTTCTATATACGCATGGGGACGAAATATCAATGGTGAATTAGGCCAGGGTAATACAACAGCTATTGTTACTCCAAAACTATTGTCTGGTGCTTCTATTGCGATGGGTACTTCGTATAATGCTACTGCAATTGTTTCTGGTTCTGCATTGTTGCTTACATGTGGTGGACAAAACAGTGGGCAGTTAGGTAATGGTATTACAACTGATGGTAATGTATACACCTTTGGTGTCAGGACATACCCAGGCGATCTTAATACTATAAGAAGTCCAGTGGATTGTAGTACAACTTACACCTCTGCATTTATGAGTCCAGATGGTATATATTATACTGGTGCTAACCGAAGTATGTTTGGTGGTATTAGTGGGACTGCTACCGTTGGTGTATATACTAAATGTAGTGATTTACCAATAACATATTCTAATATAATTCTGTGGAGTAGTGGTACTATTGGTGGTGCTATATGTAGTAGTACAGAGTTATACCAATGTGGTATCGGTCGATACATTGCTGGTGATGGTGCGACCACAACCAGGTATGGATTTAGGAAGACACCCTTACCGTGGGAAGCTTATTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
83e8a6a834ae36b234b55e2063bfc9739f4e612a86716ba0e65d0b1e1765dc97
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8688
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Novel E. coli Jumbo phage vB_Ec-M-J Kusradze,I., Rigvava,S., Karumidze,N., Goderdzishvili,M., Lossouarn,J. and Petit,M.A. 2016-10-04 — GenBank