Protein

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Genbank accession
SOK59345.1 [GenBank]
Protein name
X-linked retinitis pigmentosa GTPase regulator
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFPIISNTNIPEPAFIKDIQTGYSNLFQTIVLLNTGLFYTSGYNTSGQLGVGNKVNRFNVLTYIRNDVRLMSCNASSTMIVTNTNKVYISGARDVFNLGGTSNEVTVFTDVSSYFSTIDISQIKKISFGFTTMVLMNNNDLYGIGLNRYGELGTGVAVGYKALTFIRSNVLDVTSTGNSTVLMLTDGTVWGAGRNATYCLQSSTEGGVLNASILSLTRMFSTVTDPILGVRVSESKVIAYTSGTGYCLGSNDSGTFGDGNTSFTNTNSTGLMIQVQLPVQYKSSPSKDMVFISSPPTSSYIGIDDKLHVCGGNNNGGALGLGVSTSVIGSYTIVPVLISSTDIIRIGTYTSYIGRMNNIILGCGSTSLGITSNTLGTSFIELTLPF
Physico‐chemical
properties
protein length:388 AA
molecular weight: 41222,27430 Da
isoelectric point:6,56663
aromaticity:0,09021
hydropathy:0,18711

Domains

Domains [InterPro]
IPR009091
STR
6–215
IPR009091 IPR009091
IPR009091
STR
11–267
IPR009091
IPR009091
STR
11–260
IPR009091
IPR051553
Unmapped
101–326
IPR051553
DC_1778
STR
235–387
DC_1778
IPR009091
STR
241–372
IPR009091
SOK59345.1
1 388
Architecture
STR
STR 6-387 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
SOK59345.1
1 388
Domain Start End Length (AA) Confidence
N-terminal 1 253 253 0,1561
Central domain 254 377 125 0,5633
C-terminal 378 388 10 0,8689
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-253
Central
254-377
C-terminal
378-388

Taxonomy

  Name Taxonomy ID Lineage
Phage Yersinia phage fHe-Yen9-03
[NCBI] 		2052743 Uroviricota > Caudoviricetes > Eneladusvirus >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
SOK59345.1 [NCBI]
Genbank nucleotide accession
LT960552 [NCBI]
CDS location
range 349246 -> 350412
strand -
CDS
ATGTTACCATTTCCGATAATAAGCAACACAAATATACCTGAACCTGCGTTCATCAAGGATATACAAACTGGATACAGTAATTTATTTCAGACTATAGTATTATTGAATACTGGATTATTTTACACGAGTGGATATAACACGAGTGGACAATTAGGTGTAGGTAATAAGGTAAACAGATTTAACGTACTGACATACATAAGGAATGATGTACGATTGATGTCATGTAATGCTTCGAGTACAATGATAGTAACGAATACTAACAAAGTATATATAAGTGGTGCTAGGGATGTATTTAATTTAGGTGGTACATCGAATGAAGTAACGGTGTTTACTGATGTAAGTTCATATTTTAGTACTATAGACATATCACAGATAAAGAAGATAAGTTTTGGTTTCACCACGATGGTATTGATGAACAATAATGATTTATACGGTATAGGATTAAACAGGTACGGGGAGTTAGGTACAGGAGTTGCGGTAGGTTATAAGGCATTAACATTCATACGCAGTAATGTATTAGATGTAACGAGTACAGGGAACAGTACTGTACTGATGTTAACTGATGGAACTGTATGGGGAGCGGGAAGGAACGCGACATATTGTTTACAGAGTAGTACAGAGGGAGGGGTATTAAATGCGAGTATATTATCATTAACACGTATGTTCAGTACAGTTACAGATCCGATATTAGGGGTAAGGGTAAGTGAGTCAAAGGTAATAGCCTATACATCTGGTACTGGATATTGTTTAGGTTCTAATGATTCTGGTACATTTGGTGATGGTAATACGAGTTTCACGAATACGAACAGTACTGGATTAATGATACAGGTACAGTTGCCAGTTCAATACAAGAGTTCTCCTAGTAAAGATATGGTATTCATATCATCTCCGCCGACATCGAGTTACATTGGAATAGATGACAAATTACATGTATGTGGTGGTAATAACAATGGTGGTGCATTGGGATTAGGAGTAAGTACATCAGTAATAGGAAGTTATACGATAGTACCTGTATTAATATCTAGTACAGATATAATAAGGATAGGGACATACACGAGTTATATAGGAAGGATGAATAATATAATATTGGGGTGTGGTAGTACTTCATTGGGTATAACGTCTAATACATTAGGCACATCATTTATAGAATTAACATTACCATTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2b1995dcd4587f0cf53b3c3b8d8677d2dd7731b49202d46bd4bc4ff213744e84
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8542
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50