Protein

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Genbank accession
QIG65968.1 [GenBank]
Protein name
putative tail receptor-binding protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MTTIRITELDRNTSPSKTDLLATDNTTTGTRASTIEEAVNSVVKKANNEEAVTGTDNTKFMTPESTKTAIDGLSVPKTRTISTTSDLTGGGALTGNLTIGLSSGVIANLAKANTSVQPEQLELKLDKPSGGTNGDLIRGDGSLVAANTFATNTQGALADTAVQPSQLTAYALKSENDLKLDKPVDGTANNIIKGDGTIVELSTLATSDQGTKADNAVLFTGQNLTETQKSQARNNIGTDYLNPYRNKLLNGGFSVAQRGNGPFTQNEYTLDRWYLFNGSGSVNEIKRINTTTNDYSSGVLPRSTQYNVEWKRSASGTETSWFGQRIEGVHHLTGRKITLTFYAKALQPVKLFPYVHQSFDNVEADPLYTPFPDVNITTEWQKFTYTIDLPLSLNIDTIGYNSYANIFFNWYNTEPNTTITISRISVVEGDATLESDPFSPRHIQQELALCQRYYQNSIVRFKVGQTQVGQTFYITSQSLPVEMRIIPTITSNNQSVFTQNNTDTITTSSNLIVAITATTKTLRINGQYNGAGNTSGFSCDVFAMAEL
Physico‐chemical
properties
protein length:547 AA
molecular weight: 59548,34840 Da
isoelectric point:5,27843
aromaticity:0,07861
hydropathy:-0,40238

Domains

Domains [InterPro]
DC_0568
STR
3–546
DC_0568
IPR008979
STR
248–428
IPR008979
G3DSA:2.60.120.260
STR
259–427
G3DSA:2.60.120.260
QIG65968.1
1 547
Architecture
STR
STR 3-546 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Ochrobactrum phage vB_OspM_OC
[NCBI] 		2712956 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Ochrobactrum sp. POC9
[NCBI] 		2203419 Pseudomonadota > Alphaproteobacteria > Hyphomicrobiales > Brucellaceae > Ochrobactrum >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QIG65968.1 [NCBI]
Genbank nucleotide accession
MT028491 [NCBI]
CDS location
range 174342 -> 175985
strand +
CDS
ATGACTACAATTCGAATTACTGAATTGGATAGGAATACTAGCCCTTCCAAAACAGATTTGCTTGCTACCGACAATACAACAACTGGAACAAGAGCATCTACTATTGAAGAAGCTGTTAATTCAGTTGTCAAGAAAGCCAATAATGAAGAGGCTGTAACCGGTACAGACAATACCAAATTCATGACTCCAGAAAGCACTAAGACCGCAATTGATGGTCTTAGTGTTCCTAAAACTCGCACTATTAGCACCACTTCTGATTTAACAGGTGGTGGAGCGCTTACAGGTAATTTAACAATTGGACTTTCATCTGGTGTAATTGCAAATTTAGCCAAAGCAAATACATCAGTTCAACCAGAACAACTTGAATTAAAACTTGACAAACCGTCTGGTGGTACAAATGGAGATTTGATTCGCGGTGATGGTTCTCTTGTTGCGGCGAATACCTTTGCAACAAACACTCAAGGTGCTTTAGCTGATACTGCCGTTCAACCGTCTCAATTAACTGCATATGCACTCAAATCAGAAAATGATTTGAAGCTGGATAAACCAGTTGATGGAACAGCTAACAACATCATCAAAGGTGATGGTACAATTGTAGAATTAAGCACTTTGGCAACTTCTGACCAAGGAACGAAAGCCGATAATGCTGTATTATTTACCGGTCAAAATCTTACTGAAACACAAAAATCACAAGCAAGAAACAACATTGGTACAGACTATCTAAACCCATATAGAAACAAATTATTGAATGGGGGATTTAGTGTCGCACAAAGAGGAAATGGACCATTTACACAAAATGAATACACACTAGATCGATGGTACTTATTTAATGGTTCTGGTTCTGTAAATGAAATAAAAAGAATTAACACTACAACCAACGATTATAGCAGTGGAGTTCTTCCAAGATCAACACAATATAACGTTGAATGGAAGAGAAGTGCTTCTGGAACAGAAACAAGTTGGTTTGGCCAGCGTATTGAAGGTGTACATCATCTAACTGGTCGAAAAATTACTTTAACATTTTATGCCAAAGCTTTACAGCCAGTTAAACTTTTCCCATACGTCCACCAATCTTTCGATAATGTTGAAGCTGATCCTCTATACACACCATTTCCAGATGTTAACATAACAACAGAATGGCAAAAATTTACTTATACAATAGATTTACCGCTATCATTAAACATTGATACAATTGGTTATAATAGTTATGCTAATATTTTTTTCAACTGGTATAATACAGAACCAAATACAACTATAACTATATCAAGAATATCCGTAGTTGAAGGTGATGCAACTTTAGAAAGTGATCCATTTTCACCAAGGCACATTCAACAAGAATTAGCTCTTTGTCAAAGATATTATCAAAATTCTATTGTTAGATTTAAAGTTGGACAAACCCAAGTAGGACAGACATTTTACATAACTAGTCAATCCCTTCCAGTTGAAATGAGAATAATTCCAACAATCACTTCCAATAATCAAAGTGTGTTTACTCAAAATAATACGGACACTATAACAACATCATCAAATTTAATTGTGGCAATCACCGCGACCACAAAAACATTAAGAATTAACGGACAATACAACGGCGCGGGAAATACATCTGGATTTTCTTGTGATGTATTTGCTATGGCCGAATTATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
143240a38ef69d2bfa27a645431c62a6102311a8a2fe84ab3441c0c93e442eb9
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8101
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and Characterization of First Virulent Phages, Including a Novel Jumbo Virus, Infecting Ochrobactrum spp. Decewicz,P., Golec,P., Szymczak,M., Radlinska,M. and Dziewit,L. 2020-03-18 — GenBank