Protein

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Genbank accession
YP_009614694.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,91
TF
Evidence RBPdetect2
Probability 0,89
Protein sequence
MAYTEIAMAVGNSPEILARXVKVMMSSGFQPYGDVQMLSGTLFGMKMAKGTTNNVEDFMVTSDTTIQGLVNRVNRYLAQGWKRFGNAHFEDGAYISALAKGDFASDEXGGSGEAGPQGPVGPQGPAGPAGEAGPQGPQGPTGATGPAGAAGAKGDTGPAGPAGPQGPQGETGEAGPQGPMGPTGATGPAGPKGDKGDAGPVGPAGLTFRGVYDAATAYVKDDVVTFNNSSWFATTAVTGENPDVSDSWELLAAQGAPGPQGATGPAGPTGPAGPAGIQGPQGERGLQGEQGPTGPQGLQGAAGAVGPQGPAGPQGEPGIQGPVGPQGPIGPKGDKGDPGISRTFMKVKXSPDVGTNHMLRLPAPLNNLSVGIRLDSTVLFSIRAWIDEGSTARNIRGNIEGFNNTDNYFNTTVRTAISSSSVTGTALVTGIGEFQRIRPYVFSFYETTTGTAWRVTINLFTVGYVVSDNQDLCIEVVRLDA
Physico‐chemical
properties
protein length:481 AA
molecular weight: 48258,92040 Da
isoelectric point:4,75642
aromaticity:0,06695
hydropathy:-0,31862

Domains

Domains [InterPro]
DC_1122
ATT
3–106
DC_1122 IPR050149 DC_1535
DC_0876
STR
149–288
DC_0876
IPR008160
STR
151–205
IPR008160 IPR036573 IPR008160
IPR003610
CBM
209–251
IPR003610 DC_2298
G3DSA:2.10.10.20
ATT
211–250
G3DSA:2.10.10.20
YP_009614694.1
1 481
Architecture
ATT
STR
ATT
STR
RBD
ATT 3-106 | STR 149-210 | ATT 211-250 | STR 251-356 | RBD 357-481
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage phiKP26
[NCBI] 		2886927 Uroviricota > Caudoviricetes > Drexlerviridae > Rogunavirus > Rogunavirus KP26
Host Salmonella enterica subsp. enterica serovar Oranienburg
[NCBI] 		28147 Pseudomonadota > Gammaproteobacteria > Enterobacterales > Enterobacteriaceae > Salmonella > Salmonella enterica

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009614694.1 [NCBI]
Genbank nucleotide accession
NC_042038.1 [NCBI]
CDS location
range 9098 -> 10543
strand +
CDS
ATGGCTTACACAGAAATTGCTATGGCAGTAGGGAATTCACCTGAAATCTTAGCCAGGANCGTAAAAGTGATGATGTCATCAGGCTTTCAGCCATATGGTGATGTGCAGATGCTAAGCGGCACCCTCTTTGGCATGAAGATGGCGAAAGGAACAACAAACAACGTTGAAGACTTCATGGTTACATCCGACACCACAATTCAGGGGCTAGTTAACAGGGTTAACCGATATCTAGCGCAGGGCTGGAAAAGGTTTGGCAATGCTCACTTCGAGGATGGCGCTTATATTTCAGCTCTGGCTAAAGGTGATTTTGCAAGTGATGAAGNAGGGGGTTCAGGTGAAGCAGGTCCACAAGGTCCGGTTGGTCCGCAGGGTCCAGCAGGTCCCGCAGGCGAAGCTGGTCCGCAAGGCCCTCAAGGTCCAACTGGTGCAACTGGCCCAGCAGGTGCGGCAGGCGCCAAAGGTGACACTGGTCCGGCAGGCCCTGCAGGCCCGCAAGGTCCTCAAGGCGAGACTGGAGAAGCTGGTCCACAGGGTCCTATGGGCCCAACAGGTGCAACAGGTCCGGCTGGCCCAAAAGGTGATAAAGGTGATGCAGGTCCAGTTGGTCCGGCAGGCTTGACATTCCGTGGGGTGTACGACGCAGCGACAGCTTACGTTAAAGATGATGTTGTTACATTCAATAACTCCAGCTGGTTTGCTACCACTGCTGTTACCGGAGAGAATCCAGATGTTAGCGATTCCTGGGAATTGCTGGCTGCACAAGGCGCCCCTGGCCCACAAGGAGCAACCGGTCCAGCAGGCCCGACTGGCCCAGCAGGCCCGGCTGGCATTCAAGGTCCTCAGGGAGAAAGAGGCCTTCAGGGTGAGCAGGGTCCGACAGGTCCGCAAGGCTTGCAAGGTGCAGCAGGTGCAGTCGGGCCTCAAGGCCCAGCAGGTCCTCAGGGTGAGCCAGGAATACAGGGTCCTGTTGGCCCTCAAGGTCCAATTGGCCCTAAAGGCGATAAGGGAGACCCGGGAATATCAAGAACCTTCATGAAAGTTAAANCATCGCCTGATGTTGGCACTAATCATATGTTAAGACTACCAGCTCCTCTTAACAACCTATCTGTTGGTATAAGGCTTGATTCAACAGTGCTTTTTAGCATTAGAGCCTGGATTGATGAGGGAAGCACTGCCAGGAACATAAGAGGTAATATTGAGGGCTTCAATAATACAGATAACTACTTCAATACAACAGTAAGGACAGCAATATCTTCATCTTCCGTAACTGGAACAGCATTGGTTACTGGCATTGGTGAATTTCAAAGAATAAGGCCATATGTTTTTAGCTTTTATGAAACCACAACAGGAACGGCGTGGAGAGTAACAATAAATCTATTTACAGTCGGTTATGTTGTGAGCGACAATCAAGACCTGTGTATAGAAGTTGTAAGGCTTGATGCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c4f6af1426ec1684746289045a9862b4677bd2479d9fb65d46702a150caf0a08
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,5224
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50