Protein

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Genbank accession

YP_009802988.1 [GenBank]

Protein name

tail fiber protein

RBP type

Evidence GenBank

Probability 1,00

Evidence Phold

Probability 1,00

Evidence RBPdetect

Probability 0,90

Evidence RBPdetect2

Probability 0,95

Protein sequence

MAYVWYIGKANKRELRGEEWPGGLVVWNVKNGFSLPQGMFTEAQLNILDADRDFLLNQTEEVRQLPAAEDPVFGDNMAEYWYSKTRQLHLEILEALETGEFRGEQGIQGIQGPKGDKGDKGDKGDKGDTGAQGQQGIQGLKGDTGNTGATGRGFNPRGAWAATTAYAVDDIVTVGGETWRCVTAHTSGASWASTNWERWAQKGSTGQGYTFRGAWAASTAYALYQTLSYQGQFYQVTTAHTSTSTFDATKFALLAGKGDKGDKGDVGEKGDKGDKGDQGNQGVQGIQGTQGPQGQQGVQGPKGDKGDMGEGLHFDHFPATYAEMLAIPSPAEGDVAMVLSTTRTYVYAGGSWPSNEEDGIMLRGPMGPAGPQGEQGPQGTQGIQGTQGPQGEQGPEGDQGIQGPKGDKGDKGDTGNQGIQGDQGPQGLTGQQGIQGVKGDKGDTGDPGTVIGALPPTGVTGKLYVTP

Physico‐chemical properties

protein length:	467 AA
molecular weight:	48959,94130 Da
isoelectric point:	4,76182
aromaticity:	0,07923
hydropathy:	-0,74904

Domains

Domains [InterPro]

DC_0876
STR
1–210

DC_0876 G3DSA:2.10.10.20 IPR008160 DC_2298

IPR008160
STR
102–151

IPR008160 G3DSA:2.10.10.20 DC_1819 IPR008160

IPR050149
Unmapped
103–449

IPR050149

cd12214
CBM
159–195

cd12214 DC_1266

IPR003610
CBM
159–193

IPR003610

IPR036573
STR
159–195

IPR036573

YP_009802988.1

1 467

Architecture

STR

ATT

STR

ATT

STR

STR 1-157 | ATT 158-203 | STR 204-213 | ATT 214-253 | STR 254-466 |

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Domains [InterPro]

Domain ID	Category	Cluster	Start	End	Layer	Name	Pref Zone	Confidence	Evidence	Support
DC_0876	STR	DC_0876	1	210	Novel HMM	DC_0876	Central	Low	Positional only	94 proteins / 94 hits
IPR008160	STR	DC_0536	102	151	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
IPR050149	Unmapped	-	103	449	InterPro	Collagen superfamily	-	-	-	-
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	158	203	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
cd12214	CBM	DC_0028	159	195	InterPro cluster	ChiA1_BD	C-terminal	High	Text match	29 proteins / 44 hits
IPR003610	CBM	DC_0028	159	193	InterPro cluster	Carbohydrate binding module family 5/12	C-terminal	High	Text match	29 proteins / 44 hits
IPR036573	STR	IPR036573	159	195	Merged direct domain	Carbohydrate-binding module superfamily 5/12	Central	Low	Positional only	2 proteins / 2 hits
DC_1819	STR	DC_1819	204	332	Novel HMM	DC_1819	Central	Low	Positional only	62 proteins / 62 hits
G3DSA:2.10.10.20	ATT	G3DSA:2.10.10.20	214	253	Merged direct domain	G3DSA:2.10.10.20	N-terminal	Low	Positional only	19 proteins / 19 hits
IPR008160	STR	DC_0536	258	309	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_2298	STR	DC_2298	312	419	Novel HMM	DC_2298	Central	Low	Positional only	339 proteins / 339 hits
IPR008160	STR	DC_0536	364	418	InterPro cluster	Collagen triple helix repeat	C-terminal	High	Text match	355 proteins / 386 hits
DC_1266	STR	DC_1266	401	466	Novel HMM	DC_1266	Central	Low	Positional only	66 proteins / 66 hits

Taxonomy

	Name	Taxonomy ID	Lineage
Phage	Gordonia phage Suzy [NCBI]	2201430	Uroviricota > Caudoviricetes > Terapinvirus >
Host	No host information

Coding sequence (CDS)

Genbank protein accession

YP_009802988.1 [NCBI]

Genbank nucleotide accession

NC_047990.1 [NCBI]

CDS location

range 24785 -> 26188
strand +

CDS

ATGGCTTACGTCTGGTATATCGGCAAGGCCAACAAGCGAGAGCTACGCGGCGAAGAATGGCCGGGTGGCCTTGTCGTGTGGAACGTGAAGAATGGCTTCAGCCTTCCTCAGGGAATGTTCACAGAAGCTCAGCTGAATATACTGGACGCAGATCGTGACTTCCTCCTGAACCAGACCGAAGAGGTCCGCCAGTTGCCAGCGGCCGAAGATCCTGTCTTCGGCGACAACATGGCCGAGTACTGGTACTCCAAGACTCGTCAACTTCATCTGGAGATACTCGAAGCTCTCGAGACCGGCGAGTTTCGGGGCGAGCAGGGTATCCAGGGTATCCAAGGCCCCAAGGGTGACAAGGGAGACAAGGGCGACAAAGGGGACAAGGGCGACACCGGCGCTCAAGGACAGCAGGGTATCCAGGGTTTAAAGGGCGACACCGGAAACACTGGAGCAACCGGGCGAGGATTCAATCCTCGGGGTGCGTGGGCCGCTACGACAGCATACGCGGTCGACGACATCGTCACTGTCGGGGGCGAAACATGGCGATGCGTGACGGCTCACACCTCTGGAGCGTCTTGGGCGTCCACCAACTGGGAAAGATGGGCTCAGAAGGGCAGCACCGGCCAGGGATACACGTTCAGGGGCGCATGGGCCGCTTCTACAGCCTATGCCCTGTACCAAACCCTCAGCTACCAAGGTCAATTTTACCAGGTAACCACGGCCCATACCTCTACCTCGACCTTTGACGCCACTAAGTTCGCGCTCCTGGCGGGGAAGGGCGATAAGGGTGACAAGGGTGACGTCGGAGAGAAGGGCGACAAGGGAGACAAAGGAGATCAAGGCAACCAAGGTGTCCAGGGAATTCAGGGAACCCAAGGACCGCAGGGTCAGCAGGGTGTCCAGGGTCCCAAGGGTGACAAGGGTGACATGGGAGAGGGGTTGCACTTCGACCACTTCCCCGCCACCTACGCCGAAATGCTGGCGATCCCGTCTCCTGCCGAGGGCGATGTCGCGATGGTCTTGTCGACCACTCGAACATACGTCTACGCTGGCGGATCATGGCCTTCCAATGAAGAAGACGGCATCATGCTTCGCGGTCCGATGGGTCCGGCTGGACCGCAGGGCGAGCAGGGTCCACAGGGAACCCAGGGCATCCAGGGAACCCAGGGTCCGCAAGGCGAGCAAGGTCCAGAGGGCGACCAGGGTATCCAAGGACCGAAGGGCGACAAGGGCGACAAGGGCGACACAGGCAATCAGGGTATCCAGGGAGACCAGGGGCCGCAGGGGCTCACCGGCCAGCAGGGAATCCAGGGTGTCAAGGGAGACAAGGGCGACACTGGTGATCCCGGTACCGTGATCGGCGCTCTACCCCCGACCGGTGTCACCGGGAAGCTATACGTGACACCATGA

Genome Context

Tertiary structure

PDB ID

ddd5ada07f0b5055fa840bbfb52f4964f6d61bb827c92f8c66db6bdce9b9ed71

ESMFold

Source ESMFold

Method ESMFold

Resolution 0,6791

Oligomeric State monomer

Download PDB

Model Confidence

Very high
pLDDT > 90

High
90 > pLDDT > 70

Low
70 > pLDDT > 50

Very low
pLDDT < 50

Protein

Domains

Domains [InterPro]

Domains [InterPro]

Taxonomy

Coding sequence (CDS)

Coding sequence (CDS)

Genome Context

Genome Context

Tertiary structure

Predicted Aligned Error (PAE)

Model Confidence