Protein

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Genbank accession
QLI49144.1 [GenBank]
Protein name
putative tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 0,97
TF
Evidence RBPdetect
Probability 0,81
Protein sequence
MITPELIPSPFAAQGDKDPIPQTSSTGFANLRDGYTPDYEISLASNNPQAKAVERKIQNQLFFIATQNAQAWQRQMAPPWFQGMPGGYEQNAEVVRVGNDGIMRRYRSMVNANASDPLSSTTWEEQPAWSAMRSNIPMPAGGPGLSSGGEVITTGRNFNDLLNGTWEFFSDSVVIASQNAPVYPASAGAAAGMLEAKSWVSGANTFCVQRYTDRVGNVAVRGLNAGAWTNWMYAVNVMALQQGRVTYGVAAGSANAYTLTLVPQLQGGLVDGMILRVKFNTMNTGASTINVSGLGAKAIVGAANFPLTGGELGQGLIAELVFDAAGDRWRILAGAPRIQVGNADQDYQAPSWKQVKDYVASQKLTEVDWADVVNKPNVAIQDTTPWFANLELSDARPFIDFHFNNNRAKDFDYRFISEADGSMAFYSRQGSAGPTQDILFSRSNVTFLQPRLDVAKNLAYIANSGPLWQNTTADQPGWKFTFAQGVDANNNAVIAVNTTNPDGSYRSQVMRWDWASTNVIFNNRPLFAGQYTPWDSGNFDPSTKLTVSATNQIAGPTGIRNTNGNTGNMNTWGSGSTTASYGNAAIQIFGKGGGEPAAIYFDNSQTGWYLGMDKDGQLKRAGWSLGNNSYVITDESNIRTHINTMAARPIWGNVEFWGPWNFDPNLKLTLNAFNDSSYTRMTNSGAKDVGIASMTSYADAAMSFFNYEASNPTGPRAAVISFVRNGSRGVLFGLDSDNKLKWGGYSLGAVAFEIADSNNLMSLWSSHAAAPNWNGQTIWRSGNFNPDTKATLAARNTTSSPTIFSYGASGIASTGQVGALVVENNSVTNTAAAITFHSPQKYQVNFGLDADNVVKIGGGTMGGVAYPIIHSGNYNNYINQALVQVGLGGVGSYAILAVFDTSAPAASIAPGTIMDSSKLFYSSCDSTYRSSARPTGTWRCMGYVYNRDSTNGDSASLFQRVT
Physico‐chemical
properties
protein length:962 AA
molecular weight: 103403,63780 Da
isoelectric point:5,76048
aromaticity:0,10915
hydropathy:-0,27256

Domains

Domains [InterPro]
DC_0009
ATT
1–209
DC_0009 DC_1924
cd19958
STR
152–231
cd19958 DC_1924
DC_1788
STR
167–686
DC_1788
QLI49144.1
1 962
Architecture
ATT
STR
RBD
ATT 1-209 | STR 210-686 | RBD 687-962
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLI49144.1
1 962
Domain Start End Length (AA) Confidence
N-terminal 1 708 708 0,5059
Central domain 709 907 200 0,2103
C-terminal 908 962 54 0,9993
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-708
Central
709-907
C-terminal
908-962

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PaeM_USP_1
[NCBI] 		2743936 Uroviricota > Caudoviricetes > Lindbergviridae > Pbunavirus USP1 >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLI49144.1 [NCBI]
Genbank nucleotide accession
MT491204 [NCBI]
CDS location
range 31192 -> 34080
strand +
CDS
GTGATCACACCCGAACTGATCCCCAGTCCGTTTGCCGCTCAGGGCGATAAAGACCCGATTCCACAAACCTCCTCCACTGGCTTCGCAAACCTTCGCGACGGCTATACGCCGGACTACGAAATCAGCCTGGCGTCGAACAACCCGCAGGCCAAAGCGGTCGAGCGGAAAATTCAAAACCAACTCTTCTTCATCGCGACCCAGAACGCACAGGCGTGGCAGCGACAAATGGCGCCGCCGTGGTTTCAGGGCATGCCTGGCGGCTACGAACAGAATGCAGAAGTCGTGCGCGTCGGAAATGACGGCATAATGCGGCGTTATCGTTCCATGGTGAATGCCAATGCGAGCGACCCTCTCAGCAGCACGACTTGGGAAGAACAACCCGCATGGTCGGCGATGCGCTCCAACATCCCGATGCCGGCCGGAGGCCCAGGCCTATCTTCTGGCGGAGAAGTCATCACGACCGGCCGCAACTTCAACGACCTGTTAAATGGGACGTGGGAGTTCTTCTCTGATTCAGTGGTTATCGCTTCTCAGAATGCCCCCGTATATCCGGCTTCCGCTGGTGCCGCTGCTGGCATGTTGGAGGCGAAATCTTGGGTGTCCGGAGCCAATACGTTCTGCGTCCAACGCTACACTGATCGCGTCGGGAACGTCGCTGTGCGCGGGCTTAATGCCGGAGCGTGGACCAACTGGATGTATGCGGTAAACGTCATGGCCCTTCAACAAGGTCGGGTCACCTATGGAGTCGCGGCCGGATCGGCGAACGCTTACACGTTGACGCTAGTTCCGCAGCTCCAAGGCGGCCTGGTGGATGGTATGATTCTTCGGGTCAAGTTCAACACCATGAACACCGGCGCCTCCACCATCAACGTCTCCGGACTCGGCGCCAAAGCCATCGTCGGCGCGGCCAACTTCCCTCTCACCGGCGGCGAACTTGGCCAAGGACTCATCGCTGAGCTTGTATTCGACGCAGCAGGCGACCGCTGGAGAATCCTCGCAGGCGCGCCACGCATCCAAGTTGGCAACGCCGATCAAGATTACCAGGCCCCCAGCTGGAAACAGGTGAAGGATTACGTCGCGTCCCAAAAGCTGACTGAAGTGGACTGGGCTGACGTCGTCAACAAGCCGAACGTCGCTATCCAAGACACTACGCCGTGGTTCGCCAATCTGGAGTTGTCTGACGCTCGGCCTTTCATCGATTTCCACTTCAACAACAACCGCGCCAAAGACTTCGACTATCGCTTTATCTCTGAAGCTGATGGGTCGATGGCGTTCTACTCTCGCCAGGGGTCCGCTGGTCCTACCCAGGATATCCTGTTCAGCAGGTCGAATGTTACATTCCTCCAGCCGCGACTGGATGTTGCGAAAAACCTCGCGTACATCGCGAACTCTGGTCCCCTTTGGCAGAACACCACTGCCGATCAGCCTGGTTGGAAATTCACCTTCGCACAAGGTGTGGACGCCAACAACAACGCGGTTATCGCAGTCAATACCACCAATCCGGACGGTTCCTATCGTTCACAGGTCATGCGATGGGACTGGGCGTCCACGAACGTCATATTCAACAACCGTCCGCTCTTCGCCGGTCAATACACCCCTTGGGATTCTGGGAACTTCGATCCTTCCACCAAGTTGACGGTGAGTGCTACGAACCAAATCGCCGGCCCAACCGGGATTCGGAATACCAACGGCAACACCGGCAACATGAACACCTGGGGTTCCGGCTCCACGACGGCATCCTATGGCAATGCTGCCATTCAAATCTTCGGAAAAGGGGGCGGTGAGCCTGCCGCGATCTATTTCGACAACTCCCAGACCGGATGGTATCTGGGCATGGACAAGGATGGACAGCTCAAGCGGGCCGGCTGGTCGCTCGGCAATAACTCCTATGTGATCACCGACGAATCCAACATCCGAACCCATATCAACACAATGGCTGCGCGCCCGATTTGGGGGAATGTCGAGTTCTGGGGTCCGTGGAACTTCGATCCGAATCTTAAACTCACTTTGAACGCTTTCAATGATAGCTCATACACCAGGATGACCAACAGCGGCGCGAAAGACGTTGGTATCGCGTCCATGACGAGTTATGCTGATGCGGCCATGTCATTCTTCAACTATGAAGCCTCGAATCCGACCGGGCCGCGCGCGGCCGTTATTTCGTTCGTGAGAAATGGATCGCGTGGAGTGCTATTCGGCTTGGATTCTGACAACAAGCTGAAGTGGGGCGGATATTCCCTAGGGGCCGTCGCGTTCGAGATTGCCGACTCCAACAACCTCATGAGCCTGTGGTCATCCCACGCTGCCGCGCCGAACTGGAACGGGCAGACCATCTGGAGGTCGGGAAACTTCAACCCAGACACCAAGGCGACTTTGGCAGCTCGCAATACGACGTCATCCCCTACAATATTCAGTTATGGGGCGTCCGGAATCGCATCAACCGGACAGGTCGGTGCGTTGGTTGTGGAAAACAACAGCGTCACCAATACCGCAGCCGCCATCACGTTCCATTCGCCGCAGAAATATCAGGTCAACTTCGGCCTGGATGCGGACAACGTGGTAAAGATCGGTGGCGGCACAATGGGCGGCGTAGCATATCCCATCATCCACTCCGGCAACTACAACAACTACATCAACCAGGCGCTGGTTCAGGTGGGTCTTGGCGGAGTCGGTTCCTACGCGATCCTTGCCGTATTTGACACCTCCGCGCCGGCAGCGTCCATTGCCCCCGGAACGATCATGGACAGTTCCAAGCTGTTCTATTCGTCCTGCGATTCGACCTATCGCAGCAGCGCCCGTCCGACGGGCACCTGGCGCTGCATGGGGTATGTGTATAACCGAGACTCCACCAACGGCGACTCGGCATCCCTATTCCAGCGGGTAACGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e3fdaabfd0c0c3868eb94ba63ee3dd8b952c70cde2fd282aa1adb93ee69860eb
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6106
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Identification and characterization of new bacteriophages to control multidrug-resistant Pseudomonas aeruginosa biofilm on endotracheal tubes Oliveira,V.C., Bim,F.L., Macedo,A.P., Monteiro,R.M., Santos,E.S., Silva-Lovato,C.H., Paranhos,H.F.O., Melo,L.D.R., Santos,S.B. and Watanabe,E. 2020 33123112 GenBank