Protein

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Genbank accession
YP_009620698.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVPKKVGSITLEYDRGDGVIESQAFDAEFHNALITGDISALTGTFTGKLDANAIDAVSRLNIAGRAVAITKAGKRASSDGLGFDDDGVYRSLIDIALEVPLGTTSGVFVAANLSYQCVDTKGDENSMFPCQYRIMVDGVAYFTSAVEAWGNWFLMFDYHIHEMLLYMKAGQTHTISLQYRWFDRPTNVYPLFRNITYRADILRK
Physico‐chemical
properties
protein length:204 AA
molecular weight: 22646,42980 Da
isoelectric point:5,31521
aromaticity:0,11765
hydropathy:-0,03480

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage nickie
[NCBI] 		2048977 Uroviricota > Caudoviricetes > Nickievirus >
Host Pseudomonas syringae pv. avii
[NCBI] 		663959 Pseudomonadota > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas > Pseudomonas syringae

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009620698.1 [NCBI]
Genbank nucleotide accession
NC_042091.1 [NCBI]
CDS location
range 26539 -> 27153
strand +
CDS
GTGGTGCCTAAAAAAGTAGGTTCCATCACCCTGGAATACGACCGGGGTGATGGAGTGATCGAATCACAAGCCTTCGACGCCGAGTTCCATAACGCCCTGATCACCGGTGACATCAGTGCCCTGACGGGCACTTTCACTGGCAAGCTGGATGCCAACGCAATCGACGCAGTGAGCCGGCTGAACATCGCCGGCCGCGCTGTAGCGATCACGAAAGCTGGCAAGCGGGCGAGCAGTGACGGTCTTGGTTTCGACGACGACGGTGTGTACCGCTCGTTGATCGACATCGCTCTGGAAGTTCCTCTTGGGACAACCAGCGGGGTATTCGTCGCGGCAAACCTCTCGTACCAGTGCGTGGATACGAAGGGCGACGAGAACAGCATGTTCCCATGCCAATACCGAATTATGGTTGACGGCGTGGCCTACTTCACAAGCGCCGTGGAGGCATGGGGCAACTGGTTCCTGATGTTCGACTACCACATCCACGAAATGCTGCTGTACATGAAGGCTGGTCAGACCCACACCATCAGCCTTCAATACAGGTGGTTCGACCGTCCGACCAACGTGTATCCTCTCTTTAGGAACATCACCTATCGAGCCGACATTCTCAGGAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
2dc246eb4270f704eaf921c8710e466379656c95b336acada5d574ce8d84df3e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6464
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50