Protein

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Genbank accession
QNJ54798.1 [GenBank]
Protein name
long tail fiber distal subunit
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MAKLGPTNVFGTLNVSSTAKVGSLVVDTELFAQNTQKVFHDAYHPNADKWTTARTLNLSGDASGSVSWDGSSDVTLNVTVADDSHTHETQYISKTQSYNNNILAGAIGGQDGKPLLQVIGNDAYLGSTGRAGLQLASSVNPEWISSAGTYKLFNDAYHPNADKWTTARTLTLSGDLSGSVSIDGSSNVTLSASVANDSHTHDGRYYTESEADSRFANVSGDTFTGDVYINAALMMRVGTTPAIQRADARVDDTNYSRLHWYGRNNTGATSNFRHAWYDGSDYINVSASSSSVNFDRVSGTAIMRLQGNRVFADNYHPNADRWTTSRTLTLNGDASGSVSINGSSNVTLTVAVANDSHTHDGRYYTESESNSRYVYKSGDTMTGELKLKAGSHAGASIKALDGGVNGTNLIITSGGNTVIASGETTAANAVLSGNTSEDLHVGSDGTIYMYTNAQSWGSRKTFTLSTGGNFTAPGNITAYSDIRIKTDIKRIVNPLEKIDMLNGYTYERTDIDTPRQTGVIAQEVIEVLPEAVVEQNNMYSVSYGNMVGLLIEGIKEEKRKREDLEKRLEKLEKLLN
Physico‐chemical
properties
protein length:576 AA
molecular weight: 61987,18480 Da
isoelectric point:5,40740
aromaticity:0,07639
hydropathy:-0,45174

Domains

Domains [InterPro]
DC_1451
STR
4–112
DC_1451 IPR005601 DC_1451
IPR005601
STR
34–77
IPR005601 DC_1451 IPR005601 IPR030392 Coil
IPR030392
CHP
480–568
IPR030392
QNJ54798.1
1 576
Architecture
STR
STR 4-575 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QNJ54798.1
1 576
Domain Start End Length (AA) Confidence
N-terminal 1 39 39 0,3525
Central domain 40 238 200 0,2035
C-terminal 239 576 337 0,8458
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-39
Central
40-238
C-terminal
239-576

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage vB_ValM_R10Z
[NCBI] 		2759334 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio alginolyticus NBRC 15630 = ATCC 17749
[NCBI] 		1219076 Bacteria > Proteobacteria > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QNJ54798.1 [NCBI]
Genbank nucleotide accession
MT612988 [NCBI]
CDS location
range 182395 -> 184125
strand +
CDS
ATGGCAAAATTAGGTCCTACTAACGTTTTCGGTACATTGAATGTATCGTCAACAGCTAAGGTTGGGAGTCTAGTTGTTGATACTGAGCTTTTTGCACAAAACACGCAAAAGGTGTTTCATGATGCCTATCACCCAAATGCAGATAAATGGACTACCGCTCGTACGTTGAATTTAAGCGGCGACGCGAGTGGTAGCGTCTCTTGGGATGGTAGTTCAGATGTTACATTGAATGTCACAGTGGCAGACGACTCACATACACACGAAACGCAATACATTAGTAAAACTCAATCATACAATAATAATATTCTAGCCGGGGCAATTGGTGGTCAAGACGGAAAACCTTTACTACAAGTTATCGGAAATGATGCGTATTTAGGATCGACTGGGCGAGCGGGATTGCAACTCGCGTCAAGCGTCAATCCTGAGTGGATTAGCAGTGCTGGTACATATAAGCTATTCAATGACGCTTATCACCCAAATGCAGATAAATGGACTACCGCTCGTACGTTGACATTGAGTGGGGATTTGAGTGGGTCAGTTTCTATTGATGGTAGTTCTAACGTAACGTTATCAGCCTCAGTTGCTAATGACTCACATACCCACGATGGTAGATATTATACTGAATCTGAAGCAGACTCTAGGTTTGCAAATGTATCAGGTGATACGTTCACTGGCGACGTTTATATAAACGCTGCATTGATGATGAGGGTAGGTACAACTCCTGCTATACAGCGAGCTGATGCTAGAGTCGATGATACCAATTACTCTAGATTGCATTGGTATGGTCGAAATAATACTGGGGCGACTAGCAACTTTCGACATGCTTGGTATGATGGGTCTGATTACATTAATGTCAGTGCATCATCTAGTAGCGTGAACTTCGATAGAGTTAGTGGAACTGCAATCATGCGACTTCAAGGGAATCGCGTATTTGCTGACAATTATCATCCAAATGCAGATCGATGGACTACGTCTCGTACACTAACCTTGAATGGCGATGCAAGTGGATCAGTTTCAATTAACGGTAGTTCTAATGTAACATTAACAGTTGCTGTTGCCAACGATTCTCATACGCATGATGGTCGTTATTACACAGAATCTGAATCCAATTCGAGATACGTGTATAAATCTGGCGATACGATGACCGGCGAATTGAAACTAAAGGCAGGTTCGCACGCAGGCGCGTCGATTAAAGCATTGGACGGTGGAGTCAATGGTACGAACTTGATTATAACGTCAGGTGGTAACACCGTAATTGCATCGGGTGAGACGACCGCTGCAAATGCAGTATTGTCGGGAAATACAAGCGAAGATCTTCATGTTGGTTCCGATGGTACGATATACATGTACACTAATGCTCAATCATGGGGTAGTCGCAAAACGTTCACATTATCTACGGGTGGTAATTTCACTGCGCCGGGCAATATCACTGCGTATTCTGATATAAGAATCAAAACTGATATTAAGCGCATTGTTAACCCTCTTGAAAAGATTGACATGCTGAATGGTTATACGTATGAGCGTACTGACATAGACACACCGCGTCAAACTGGTGTAATTGCTCAAGAAGTAATTGAAGTTCTACCAGAAGCAGTCGTTGAGCAAAACAACATGTATTCTGTTTCATACGGGAACATGGTTGGTTTGTTGATCGAAGGTATCAAGGAAGAGAAGAGAAAACGCGAAGATCTTGAAAAACGACTTGAAAAACTAGAAAAACTACTTAATTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
ed2139ed80494c09fecba69d6d0e7d448be68b21629b93ee3abb15cae4633088
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6082
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50