Protein

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Genbank accession
WGH49913.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,90
Protein sequence
MAVYCPNNGITYANLRLWIDAVRDTDFGDTAVAFVNSNETYGGTNPLHFVGSWPYGFRVEASAPFNGIYSPTTLTTLTFEGPSSVVIDINSGNVLRDKLCEITGFIINHRGQGIEVRDNRDYLDVRIHENFVRSTGNNTMSTWLGTNNILVSTHSLTTAVSINNNICFGAAREAIKTYMNYAGNGITNLGINNNVCYSSGREADAYPSVRCTGGGTVDLQDNLLFPSGATEVSKAYDISAAIAGNVSNNGSNKTTGDILVDAIDVFTDVDALDFRVKTNAAILLTAPNIGAFHERVTGKLQAYSVTVNYSDFTQVSLPYKQASIQTYYLDLTINQEGDVVAAGYTRQSSFMDGDVILASHGNLEFDQLARAFAADTGHNHDGGEGSGGIITRIGNIEGSLNLTMNSQGIGGSVVLDDDTFTNASQYRLATQRSTKNYVLARTSPEFTKQQVLANPNTKLLTDEEYQKVIQLPPIGSDLLTAPPADGKTYAQKDGLWQEIPSSIEQLTLQTNNVSRLKGYNTSGTTLDVAYVSNQDKIELGDVSANLNLNGSSLTFNSKRVYSDDNLTYRVYNDSVSGDISLPSRYKESTVVIVERDNNIILNPAASKDDVVIVHKKTKAGVVTISGGSIKSINEKAQVQVDPQAMFEEGTHGSVLLICTDNPDGLTASWFIQQQ
Physico‐chemical
properties
protein length:674 AA
molecular weight: 72883,94700 Da
isoelectric point:4,80877
aromaticity:0,08012
hydropathy:-0,24866

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WGH49913.1
1 674
Domain Start End Length (AA) Confidence
N-terminal 1 14 14 0,9162
Central domain 15 267 254 0,9668
C-terminal 268 674 406 0,4019
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-14
Central
15-267
C-terminal
268-674

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudoalteromonas phage vB_PtuP_Slicky01
[NCBI] 		3038240 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WGH49913.1 [NCBI]
Genbank nucleotide accession
OQ508958 [NCBI]
CDS location
range 2864 -> 4888
strand +
CDS
ATGGCTGTCTACTGTCCTAACAATGGCATTACATATGCTAACTTAAGACTTTGGATTGATGCCGTTAGGGACACAGACTTTGGGGATACCGCTGTAGCTTTCGTTAACTCTAACGAAACCTATGGTGGTACTAACCCATTACACTTTGTAGGTAGCTGGCCTTACGGCTTTAGGGTCGAAGCATCAGCACCTTTCAATGGTATATATAGTCCAACAACCCTAACGACTTTAACATTCGAAGGGCCTTCGTCTGTCGTTATTGACATCAACTCAGGTAATGTATTACGTGATAAACTATGTGAGATAACTGGATTCATCATAAACCACAGGGGTCAAGGTATAGAGGTTAGGGATAATAGAGATTATCTGGATGTGAGAATCCATGAGAACTTTGTTAGATCTACTGGTAATAATACTATGAGCACATGGCTTGGGACTAATAACATCCTAGTCAGTACCCACTCACTAACTACTGCTGTATCTATTAATAACAACATATGCTTTGGGGCTGCAAGGGAAGCAATTAAAACATACATGAACTATGCTGGTAATGGTATCACTAACTTAGGTATTAATAACAATGTATGTTATTCATCAGGTAGAGAAGCAGATGCCTACCCTTCAGTTCGCTGTACTGGTGGTGGAACTGTGGATCTACAGGATAACTTATTATTCCCTAGTGGGGCAACAGAGGTATCTAAAGCTTATGATATATCAGCTGCTATTGCAGGGAATGTATCAAACAATGGTAGTAACAAAACAACTGGTGATATCTTAGTAGATGCTATTGATGTGTTCACAGATGTAGATGCACTTGACTTTAGAGTTAAGACTAATGCTGCTATATTATTAACAGCCCCGAACATAGGTGCCTTTCACGAGAGAGTAACTGGTAAGTTACAAGCTTATTCTGTTACTGTGAATTACTCAGACTTTACTCAGGTTAGCTTACCATATAAGCAAGCCTCTATTCAAACATACTATTTAGATTTAACAATTAACCAAGAAGGAGATGTCGTGGCAGCAGGATATACTAGACAGAGTTCTTTCATGGACGGTGACGTTATCCTAGCGTCCCATGGTAACTTAGAGTTTGACCAATTAGCTAGGGCATTTGCCGCTGACACCGGACACAATCATGATGGTGGTGAAGGTAGTGGTGGTATTATAACTAGGATTGGTAACATTGAAGGTTCACTAAATCTTACAATGAACTCTCAAGGTATAGGTGGTTCAGTTGTGCTAGATGATGATACATTTACTAATGCATCACAATATCGCTTAGCAACACAAAGATCCACTAAGAACTACGTCCTAGCAAGAACATCACCAGAGTTTACTAAACAACAAGTACTGGCTAACCCTAATACTAAACTATTAACAGATGAAGAATACCAAAAGGTTATTCAGTTACCTCCTATAGGTTCTGATTTACTCACAGCACCACCTGCTGATGGTAAGACATACGCACAGAAGGATGGCTTATGGCAGGAGATTCCTAGTTCGATTGAGCAGCTGACCTTACAGACTAATAATGTCTCTAGGCTTAAGGGTTATAATACTTCAGGTACTACGTTAGATGTAGCTTATGTCTCTAATCAGGATAAGATTGAATTAGGTGATGTATCCGCTAACCTTAACTTAAATGGTTCTTCATTAACCTTTAACTCTAAGCGGGTTTACTCTGATGATAACCTAACCTATCGCGTTTATAATGACTCAGTATCAGGTGATATCTCATTACCTTCAAGATACAAAGAGTCAACAGTAGTTATCGTAGAGAGAGATAATAATATTATACTAAACCCTGCGGCTTCTAAAGATGATGTGGTTATAGTCCATAAGAAAACTAAGGCTGGTGTAGTAACTATATCAGGTGGTTCTATTAAGAGCATCAATGAGAAAGCTCAGGTTCAAGTAGACCCACAGGCTATGTTTGAAGAAGGTACTCATGGTTCTGTGTTATTAATATGTACAGATAATCCTGATGGCCTAACAGCCTCATGGTTTATCCAACAACAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9f2bbf1596392355a8c30b16c31fec9c77983d94e2e5363418de4c13068fed17
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6227
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Ecogenomics reveals distinctive viral-bacterial communities in the surface microlayer of a natural surface slick Rahlff,J., Wietz,M., Giebel,H.-A., Bayfield,O., Nilsson,E., Bergstrom,K., Kieft,K., Anantharaman,K., Ribas-Ribas,M., Schweitzer,H.D., Wurl,O., Hoetzinger,M., Antson,A. and Holmfeldt,K. 2023 — GenBank